Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01262 ATGGCTTCCTTCAACctcttttattctcttctttttctccctctGCTAGGAACTTTCTTTGCTGTTGGGGTTTCCATTAAAGCAGCTGTTCTAAATCCTTTTAATTGCTCTTCAAAAATCATAACTTGCAATGCTTCACTCTACCACATAAACCATCATCTCCAGATTGAGGATATTGCCTCTTTTTACTCTGTGAATATATCTCAAATCAAGCCCTTTACATTTGGCAGCAGAAGGGATTACCTAATAACTGTACCTTGTTCTTGCAAAAATACCAGTGATCTAAGTGGATATTTCTATGATACAATCTACAGAGTGGAGAAAAATGATACCTTTTATAATATTACGAACATGGTTTACAGTGGGCAAGCCTGGCCTATTAATGATAAGTTGTTCCCTGATGACCTCTTAACAATTCATCTTCCATGTGGGTGCTCAGAGAGTGATTCTCAAATTGTGGTTACCTACACAGTGCAGCAAAATGATACCCTGGCTGAGATTGCTAATCTGCTAAATGCTACAGTGGCTAACATGCTGAGAATTAACCCAATTCTGGTGGAAAATCCATCATTCATAGATGTGAATTGGGTGCTATTTGTCCCCATGGAGTTAAATGGGCTTCCATCTGCCCTCCAAAGTGGAAAGAGACGCCATTGGACAACAATCATTGCCATCTTGGGTGTGACACTGCTTTCAGTTATCGTGATATTCATTCTCATTCTCCGCAGAAATAGAGCCAAAGAAAACAGCAAAGATCTTTCCAGAGCTGTATCAAAAAATTCAGTGCTCAGTAGAACACATAACCCCCTCCTGCATACAGAAGACATGGAAGATACAATAGCATTTGAATCAGAAGGACACAGAGTGTATCGTCTTGAGGAGATTGAAGAGGccacaaataattttgatgaaacaaaaaaaattggaagtgGTGGATATGGGATTGTATATTTTGGAATACTAGGGGATAAGAAAGTTGCCATAAAGAAGATGCTGTCCAATAAATCAAAGGAGTTCTTTGCAGAGCTCAAGGTCTTGTGTAAGATCCATCACATTAACATTGTGGAGCTGCTTGGTTATGCCAGTGGAGAAGACCATCTCTTTCTGGTTTATGAGTACGTTGCAAATGGATCTCTAAGTGATCATCTTCATGATCCATTACTAAAAGGTTATCAGCCTCTTTCTTGGGCTGCTAGAGTACAGATTGCGTTGGACACTGCTAAAGGTCTTGAATACATACATGATTACACAAAAGCACGATATGTGCACCGTGATGTAAAGACAAGTAATATTCTTCTTGATGAGAAGTTCAGAGCAAAGGTAGCAGATTTTGGACTTGCAAAGCTGGTAGAAAGGACCAACGAAGATGATGATTTTATAGCAACAAGGCTTGTTGGAACACCAGGCTACCTTCCACCAGAaTCTGTGAAGGAGCTTCTGGTGACCCCAAAAGCTGATGTCTTTGCATTTGGAGTGGTTCTAGCAGAGCTGATCACAGGAAAACGTGCACTATTTCGTGACAGAAGAGACTCAAACAACATGAAGTCACTTATTACAGTTATAAACAACGTGATCCAAAATGATAACCCAGAAGCCGCTTTGGAAAATGAAATGGATCGGAATCTTCGAGGAAGCTGTCCCATGGAGGATGTCTACAAGACAGCAGAAATAGCAATGTGGTGCTTTAGTGAAGAACCCATTAAGAGGCCTGAGATGAGGGAGGTGGTAGTGACATTGTCCCAGCTTGTCATGTCTTCAACAGAGTGGGAAGCATCACTTGGCGGAAATAGCCTTGTCTTCAGCGGATTATTGAATGGAAGATG 1823 0.3961 MASFNLFYSLLFLPLLGTFFAVGVSIKAAVLNPFNCSSKIITCNASLYHINHHLQIEDIASFYSVNISQIKPFTFGSRRDYLITVPCSCKNTSDLSGYFYDTIYRVEKNDTFYNITNMVYSGQAWPINDKLFPDDLLTIHLPCGCSESDSQIVVTYTVQQNDTLAEIANLLNATVANMLRINPILVENPSFIDVNWVLFVPMELNGLPSALQSGKRRHWTTIIAILGVTLLSVIVIFILILRRNRAKENSKDLSRAVSKNSVLSRTHNPLLHTEDMEDTIAFESEGHRVYRLEEIEEATNNFDETKKIGSGGYGIVYFGILGDKKVAIKKMLSNKSKEFFAELKVLCKIHHINIVELLGYASGEDHLFLVYEYVANGSLSDHLHDPLLKGYQPLSWAARVQIALDTAKGLEYIHDYTKARYVHRDVKTSNILLDEKFRAKVADFGLAKLVERTNEDDDFIATRLVGTPGYLPPESVKELLVTPKADVFAFGVVLAELITGKRALFRDRRDSNNMKSLITVINNVIQNDNPEAALENEMDRNLRGSCPMEDVYKTAEIAMWCFSEEPIKRPEMREVVVTLSQLVMSSTEWEASLGGNSLVFSGLLNGR 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01262 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Bva08g01262 607 SMART serkin_6 302 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01262 607 ProSiteProfiles Protein kinase domain profile. 302 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01262 607 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 19 607 - -
Bva08g01262 607 Gene3D Transferase(Phosphotransferase) domain 1 374 593 - -
Bva08g01262 607 Gene3D LysM domain 154 201 IPR036779 -
Bva08g01262 607 SUPERFAMILY Protein kinase-like (PK-like) 285 579 IPR011009 -
Bva08g01262 607 Pfam LysM domain 156 201 IPR018392 -
Bva08g01262 607 SMART LysM_2 155 201 IPR018392 -
Bva08g01262 607 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 19 607 IPR044812 GO:0019199|GO:0045087
Bva08g01262 607 Pfam Protein kinase domain 303 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01262 607 Gene3D Phosphorylase Kinase; domain 1 281 373 - -
Bva08g01262 607 SUPERFAMILY LysM domain 154 201 IPR036779 -
Bva08g01262 607 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Bva08g01262 607 CDD LysM 154 200 IPR018392 -
Bva08g01262 607 ProSiteProfiles LysM domain profile. 154 200 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01262 Bva-Chr8 6577839 6580487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01262 282 607 Receptor kinase-like Gene Family AT1G51940 51.351 4.02e-110 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva08g01262 Pkinase 2.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01262 - - gmx:100791718 802.742