Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01225 ATGGCAGAGAGTTTTGACCGTGCTACTTCAAGCCTTCTGTGCTCGGAGAACAGCAACACTCGCTTTGGTGATTTCGAATGTAATGGCGCAGATGAGTCTGGAATTTCCCCTTTATGGAACCAACAAAACATTGACGCCAACCAACGCTATCCGAGTTCGGGCAGCCATGGATCGCAACGCTTTATGGGTTTTCCTGTACAGAGTGAAGAAATAATCAGTGTAATGAttgagagggagagagaacaTTTGCCCAGAGATGATTACCTAAAGAGGCTGCGTAGTGGGGAGTTGGACCTGAGTGTTAGGAGAGAAGCTCTTGATTGGATTTGGAAGGCTCATGCTTATTATGGCTTTGGACCATTGAGCTTGTGTCTATCTATGAACTACTTGGATCGCTTCCTATCGATATATGAATTACCTAGAGGTAAAGCATGGACCGTGCAATTGTTAGCTGTAGCTTGTTTGTCAATAGCAGCTAAAATGGAGGAGACTAAAGTGCCTCAATCTGTAGATTTACAGGTGGGAGAACCGAAATTCGTTTTTGAGGCTAAAACCATACAAAGAATGGAGCTTCTAGTGTTAAACACATTGAGATGGCAAATGCTAGCTTTAACTCCTTGTTCCTTCATAGATTACTTCCTCAGAAAAATCAACCCCGAGCAACATCCAACCGAGTCATCCATTTCTAGATCAGTACAGCTCATACTTAGTACAATCAGAGGTGTTGATTTCTTGGAATTCAGGCCTTCTGAAATTGCTGCAGCAGTGGCAATTTCAGTTTCAGGGGAACTGCAAGCAATTGAGATTGATAAGGGCATATCATGTTTCTTGATTGTAGAGAAGgAGAGAGTTCTAAAATGTCTTGAACTGGTCAGAGATTTGTCACTGGTTTGTGTATCTGCTGATCTGGGCAGTAATTCAATGCCAATGGTGCCCCAGAGCCCTCTTGGGGTGTTGGACGCTTCATGCTTGAGCTATAAAAGTGATGAATTAACAGTTGGGTCATGTCCAAATTCTTCTCATAGTAGTCCAATTACTAAAAGGAGCAAATCAGAGAGACCTGATATGATTTCCAAGTCATG 1082 0.4187 MAESFDRATSSLLCSENSNTRFGDFECNGADESGISPLWNQQNIDANQRYPSSGSHGSQRFMGFPVQSEEIISVMIEREREHLPRDDYLKRLRSGELDLSVRREALDWIWKAHAYYGFGPLSLCLSMNYLDRFLSIYELPRGKAWTVQLLAVACLSIAAKMEETKVPQSVDLQVGEPKFVFEAKTIQRMELLVLNTLRWQMLALTPCSFIDYFLRKINPEQHPTESSISRSVQLILSTIRGVDFLEFRPSEIAAAVAISVSGELQAIEIDKGISCFLIVEKERVLKCLELVRDLSLVCVSADLGSNSMPMVPQSPLGVLDASCLSYKSDELTVGSCPNSSHSSPITKRSKSERPDMISKS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01225 360 MobiDBLite consensus disorder prediction 346 360 - -
Bva08g01225 360 SMART Cyclin_C_2 204 327 IPR004367 -
Bva08g01225 360 Pfam Cyclin, N-terminal domain 70 201 IPR006671 -
Bva08g01225 360 Gene3D - 85 202 - -
Bva08g01225 360 Gene3D - 75 289 - -
Bva08g01225 360 SMART cyclin_7 107 195 IPR013763 -
Bva08g01225 360 PANTHER CYCLINS 1 353 IPR039361 -
Bva08g01225 360 CDD CYCLIN 102 194 IPR013763 -
Bva08g01225 360 MobiDBLite consensus disorder prediction 333 360 - -
Bva08g01225 360 SUPERFAMILY Cyclin-like 64 201 IPR036915 -
Bva08g01225 360 PANTHER CYCLIN-D4-1-LIKE 1 353 - -
Bva08g01225 360 Pfam Cyclin, C-terminal domain 205 295 IPR004367 -
Bva08g01225 360 ProSitePatterns Cyclins signature. 102 133 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01225 Bva-Chr8 6365206 6367885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01225 62 271 Core Cell Cycle Gene Families AT5G65420 65.728 9.08e-101 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01225 K18810 - jre:108991232 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01225 08 6365206 6367885 Bva11g01211 11 12905426 12907926 BWGD