Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01217 ATGGTTATACTCCGACAGCATGTTCGAAATTACTATAATTCAGAAGCtcaaaatatgataagaaGTACCTTTCATCGTGGGATCATCTCAGAGACATACAAAAACTCGTTcttaaaaccaaaatcaaaggaagagaaaaagattgaagggaaaaagaaacataaggAAGCAGAGCAGAGACGCAGGGATCGAATTAAAGGCCAATATGCAACTCTTAGTACAGTTCTTCCCAAATTAGTCAAAACGGACAAGGCATCAATACTGGGAGAGGCTATAAGGCAAGTGATGGAGCTGAAGAAGAATGTATCAGAACTAGAAGCAGCTAGAGGAGGTAGCACAGAGGGCATAGTGTTTCCCAGTGGAGCGGACAAGTTGAATTTGGAACCCTGCAATGATGAGCAGAGCCTCGTGAAGGCTACATTGAGCTGCGAGGATAGACCAGGTTTAATGTCGGCCATTGAAAGTGCGCTGAGGGAAGTGAATGCCAGGGTGGTGAAGGCTGAGATGATAACAGTGGGAGGGAGGACCAGAAGTGTGTTATGGGTGCAAGGTTTGGCTTGTGGAAATGAAGGGATGGAAATGCTAAAGAGAACTCTCAAGTTTGTGATTCAAAGGCCAACTTCGCCGGGTTTTCATCGGCTGCCGCGGTTCACAAGATACTCATACTATCACAGCTA 677 0.4151 MVILRQHVRNYYNSEAQNMIRSTFHRGIISETYKNSFLKPKSKEEKKIEGKKKHKEAEQRRRDRIKGQYATLSTVLPKLVKTDKASILGEAIRQVMELKKNVSELEAARGGSTEGIVFPSGADKLNLEPCNDEQSLVKATLSCEDRPGLMSAIESALREVNARVVKAEMITVGGRTRSVLWVQGLACGNEGMEMLKRTLKFVIQRPTSPGFHRLPRFTRYSYYHS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01217 225 PANTHER TRANSCRIPTION FACTOR BHLH131 8 209 - -
Bva08g01217 225 SMART finulus 55 104 IPR011598 GO:0046983
Bva08g01217 225 PANTHER TRANSCRIPTION FACTOR BHLH30 8 209 IPR045847 GO:0003700|GO:0006355
Bva08g01217 225 SUPERFAMILY ACT-like 139 204 IPR045865 -
Bva08g01217 225 ProSiteProfiles ACT domain profile. 138 219 IPR002912 -
Bva08g01217 225 Coils Coil 88 108 - -
Bva08g01217 225 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 49 98 IPR011598 GO:0046983
Bva08g01217 225 MobiDBLite consensus disorder prediction 42 62 - -
Bva08g01217 225 Pfam Helix-loop-helix DNA-binding domain 51 96 IPR011598 GO:0046983
Bva08g01217 225 CDD ACT_UUR-ACR-like 140 205 - -
Bva08g01217 225 Gene3D - 46 114 IPR036638 GO:0046983
Bva08g01217 225 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 51 110 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01217 Bva-Chr8 6327641 6331082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01217 44 182 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G25710 37.324 2.60e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva08g01217 HLH 9.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01217 - - gmx:102667782 223.016