Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01211 ATGGCTCTTCCCGGTTCTCTGCATCTGTCCCATGATTTGGGACTTTGCAGGAACCAGGGCTGCAATAAACAACATTGGAGGGTAACGGGAAGAGGCATGTTACATTTATTGAGTGCAGCTCCTTCTTATCGTGTTTCGTTCCTGAAACAGGATTTCCGGAGTGCCCAACTCTTTCGCAGTGTAAATAAGCCAATATATACCTTACCAGGCAAATCCTATGCTTTTAAGTGCCATTCTTTTCTAGCACCTGGGCAACCATGCAAGTTGCCTGTTCTTAAGGCGGCTGCCACAGCTTTGGCAAGGCCCAGTAATATCTTACAAAGTAGTCCTGTCATAGTAAAATTGATTCCAGCAATTGGGGTTATCATTTTTGCTTTATGGGGTGTTGCCCCTATAATGCGTCACACAAGAAACCTGCTTCTTCATAGGAACGATAGCAATTGGAAGAAAAGTAGGACGCATCATGTAGTAACTTCTTATATTCAGCCATTACTGTTATGGACTGGAGCTATACTTATTTGCAGAGCATTGGAACCAGTAGTTCTACCTACAGAGTCTGGTCAGGTTGTTAAGGAACggcttttgaattttattagatCATTGTCAACCGTACTTTCCTTTGCCTATTGTTTATCAAGTTTGATTCGACAATCACAGAAGTTCTTTATGGAGAGTACTGACACCTGTGAGACTAGAAATATGGGATTCCAATTTGCGGGTAAAGCTGTTTATTCTGCAGTATGGATTGCTGCCTTTTCATTGTTCATGGAATTGTTGGGTTTCTCTACCCAGCGATGGGTTACAGCAGGAGGTCTTGGGACAGTTTTGCTGACTCTTGCTGGTCGTGAGATATTTACAAACTTTCTTTCAAGTGCAATGATTCATGCAACTCGGCCTTTTGTGGTGAATGAATGGATTCAGACAAAGATTGAAGGATATGAAGTTTCTGGTACCGTGGAGCATGTTGGCTGGTGGTCACCGACAATTATAAGAGGTGAGGATCGTGAAGCTGTGCACATTCCAAACCACAAGTTTACAGTGAATGTTGTGAGAAATCTGAGTCAAAAAACACATTGGCGGATCAAAACTCACCTGGCCATCAGTCATTTAGATGTCAATAAGATTAATAACATTGTTGCTGACATGCGGAAAGTATTGGCCAAAAATCCTCAAGTGGAGCAGCAGAGGTTGCACAGAAGAGTGTTTTTGGACAAtataaatcatgaaaatcAGGCTCTTTTGATTCTGGTGTCATGTTTTGTCAAGACTTCACATTACGAAGAGTATTTGTGTGTTAAGGAGGCTATACTATTGGATCTTCTGAGAGTTGTCAGCCATCACCGGGCCCGACTTGCAACACCACTCCGTACAATTCAGAAATCATACAAAGATCCTGACTTGGATAACATACCATACACAGATTCTGTATATCGTGATGCTGGAGCAGTATCTAACCGCCCATTTTTACTGATTGAACCATCATACAAAATCAGTGCAGATGACAAATCAAAAAGTCGATCAGCACGCCAAACTAACGAAAAAGATAACAAGACAACAGTGCGAAGCAAACCTGAGACCAAGTCAGATGCCAAGGTTGTGACTTCTAATTCTGATACAAATGGGAATCCGAAGACTATCGTGACATCCACAACTGAACCTGAAGTGGGTGAAAATGAGTCACTCAAGTCAGATTCAAAGGAAAACTTGGAGGTGCCAGACATGTCTGCTTCCAACTCCAAAGCAACTGGATCGGTATTAGATAATGACACTCAGAAGATTATTAATGGCCAAAAATCCAAGAGCCAGACCCTCAGAAACGTCAAGCAGAACGATGAATCTGACAATCGGATGTCCTCTCCATCATCAAGCAATACAGAGAAAGTAGGTGGGCTTCCTACTGTGCCATCAAAACAGCAAGAGGAAAGGAAACCGGTTGCACAGCCTCCTCCTCCTAGGCCCGTCCTTGAAGACAACATAGTACTTGGTGTTGCATTGGAGGGATCAAAGAGAACACTTCCTATTGAGGAGGGGGACTCTGCTAGAGAGGCAAAGGAAATGGCTGCTTACCAGGGTGGAAATGGATCTCAAAAGGTAGAGGATGGGAAAGATAAGTA 2114 0.4243 MALPGSLHLSHDLGLCRNQGCNKQHWRVTGRGMLHLLSAAPSYRVSFLKQDFRSAQLFRSVNKPIYTLPGKSYAFKCHSFLAPGQPCKLPVLKAAATALARPSNILQSSPVIVKLIPAIGVIIFALWGVAPIMRHTRNLLLHRNDSNWKKSRTHHVVTSYIQPLLLWTGAILICRALEPVVLPTESGQVVKERLLNFIRSLSTVLSFAYCLSSLIRQSQKFFMESTDTCETRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQRWVTAGGLGTVLLTLAGREIFTNFLSSAMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINHENQALLILVSCFVKTSHYEEYLCVKEAILLDLLRVVSHHRARLATPLRTIQKSYKDPDLDNIPYTDSVYRDAGAVSNRPFLLIEPSYKISADDKSKSRSARQTNEKDNKTTVRSKPETKSDAKVVTSNSDTNGNPKTIVTSTTEPEVGENESLKSDSKENLEVPDMSASNSKATGSVLDNDTQKIINGQKSKSQTLRNVKQNDESDNRMSSPSSSNTEKVGGLPTVPSKQQEERKPVAQPPPPRPVLEDNIVLGVALEGSKRTLPIEEGDSAREAKEMAAYQGGNGSQKVEDGKDK 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01211 704 SUPERFAMILY Sm-like ribonucleoproteins 284 354 IPR010920 -
Bva08g01211 704 MobiDBLite consensus disorder prediction 570 604 - -
Bva08g01211 704 MobiDBLite consensus disorder prediction 500 528 - -
Bva08g01211 704 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 1 704 - -
Bva08g01211 704 MobiDBLite consensus disorder prediction 529 556 - -
Bva08g01211 704 Pfam Mechanosensitive ion channel 241 448 IPR006685 GO:0016020|GO:0055085
Bva08g01211 704 MobiDBLite consensus disorder prediction 500 657 - -
Bva08g01211 704 Gene3D - 300 355 IPR023408 -
Bva08g01211 704 Gene3D - 196 298 - -
Bva08g01211 704 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 704 IPR045042 -
Bva08g01211 704 MobiDBLite consensus disorder prediction 613 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01211 Bva-Chr8 6280329 6286962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01211 9 694 Mechanosensitive Ion Channel Family AT5G10490 57.122 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01211 K22047 - gmx:100789444 990.719