Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01203 ATGAACCCAACCCTGGAGAGTATAGTTGTTGGTGTGCATATGGTTTGTGCGTCATGTTCGGACGCGAAGGATGTGTCTGATGGGGAAATTTTGGAGAAGATGATCAATGATTCGACGGTGAACAAGAGAGAGGATACAGAATCAACAGATGAGAAGGCTAATTTGGCCGTCAGAGCTTCATACTCTAATCTTGACTGTGTGATTGAGTCTAGAAAATCACTGGGGATTAATGAACAGAAGAATGTGAGGCATAAATATCAAAGTTTCATATCTATTAAAACAAGCAAAATGCACTGTGATTGTGTGGGCGTGAGCAGATTGGATTTGGAATCTTCGAATAAACCCACTATGAAGGCAACCATATCCATTCAAGAGAAAGGAGGAGAAGTGAAGGAAGACCCAGAAATGGTATCACATGGTAATCACATAAAAGATGATTCATGCGACGATGAAGGGTCTCCGAGAGGGGTGTTGGAAATCCCAATTTCGGGAACAGAGTCGGACCTAAGTGGGAGCAGCAGGTCGTCGTCGCCGGCGCAGAGACCAAATGACCGAGATAGTGGTGGGCCGCAGTGGAAGTCTATGATTGACGTGATCAGGAAGAAGTCTGTAAGAAGATTTTCGACGATACCTTTCCTTGGGATGAGCTATGATATTTCAAGGAAGAACTTGAGGAAGAAGTTAGGTCGAAATCGTAAAGGTGAAGACGGTGCCATTGATCTTTCAGCTATTTCTACAAAGTCCTCTTGGCGGAACTTCGATTACGCCGAACTTGCAGCCGCCACCGATAATTTCAGTTCCGAGAACTTGGTAGGGAAAGGTGGGCATGCTGAAGTTTACAAAGGGAAGTTATCCGATGGTCAAGTTGTAGCAGTAAAAATGTTGATGAACgacaaagaagaagaggacAGAGCCGGAGATTTCTTATCAGAGCTTGGGATTATTGCTCACATTAATCACCCAAATGCAGCACACTTGATTGGCTTTGGGATCGATGGTGGTCTCTTCTTTGTCCTACAATTTGCCCCACACGGCAGCCTTTCTTCTCTACTTTTCGGTTCGGAATGTATGGAATGGAGCAAAAGGTTCAAGGTAGCTCTTGGGGTGGCAGAGGGATTGCGGTATCTACACCATGATTGCCCAAGACGAATCATTCACAGAGACATAAAAGCCTCTAACATATTGCTCAGCCAAAACCATGAAGCTGAGATTTCAGATTTTGGCCTCGCCAAGTGGTTGCCTGAGAAGTGGCCACACCATGTTGTTTTCCCGATAGAGGGGACATTTGGGTATTTGGCTCCAGAGTACTTTATGCACGGAATTGTGGAAGAGAAGACTGATGTATTCGCATTTGGGGTTTTGTTACTGGAGCTCTTAACGGGTCGTCGAGCAGTAGATTCAAGTAGACAAAGCCTCGTGATCTGGGCAAAACCACTGCTGGATGCAAACAATTACAAGGAATTAGCAGACCCCAGATTAGGAGATGCATATGATCCCAATGAGATAAAGCGTGTCATGGTGACAGCTTCAATGTGCGTCCGCCACTTAGCCTCCAAGCGACCATACATGAATGAGGTTGTGCAGCTACTCAAGGATGAAGCTAAACCTGCTGATCTGAAACAAAAATCACAGGCGTCAAGATCGCTATTGTTAGATGCATGTGACCTGGAAGATTATACGTGCTCAAATTACTTGAATGAGATCGACCGTCATAGGCAATTAGTGATGGAGTG 1733 0.4455 MNPTLESIVVGVHMVCASCSDAKDVSDGEILEKMINDSTVNKREDTESTDEKANLAVRASYSNLDCVIESRKSLGINEQKNVRHKYQSFISIKTSKMHCDCVGVSRLDLESSNKPTMKATISIQEKGGEVKEDPEMVSHGNHIKDDSCDDEGSPRGVLEIPISGTESDLSGSSRSSSPAQRPNDRDSGGPQWKSMIDVIRKKSVRRFSTIPFLGMSYDISRKNLRKKLGRNRKGEDGAIDLSAISTKSSWRNFDYAELAAATDNFSSENLVGKGGHAEVYKGKLSDGQVVAVKMLMNDKEEEDRAGDFLSELGIIAHINHPNAAHLIGFGIDGGLFFVLQFAPHGSLSSLLFGSECMEWSKRFKVALGVAEGLRYLHHDCPRRIIHRDIKASNILLSQNHEAEISDFGLAKWLPEKWPHHVVFPIEGTFGYLAPEYFMHGIVEEKTDVFAFGVLLLELLTGRRAVDSSRQSLVIWAKPLLDANNYKELADPRLGDAYDPNEIKRVMVTASMCVRHLASKRPYMNEVVQLLKDEAKPADLKQKSQASRSLLLDACDLEDYTCSNYLNEIDRHRQLVME 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01203 577 ProSiteProfiles Protein kinase domain profile. 265 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01203 577 Gene3D Transferase(Phosphotransferase) domain 1 343 554 - -
Bva08g01203 577 Pfam Protein tyrosine and serine/threonine kinase 268 530 IPR001245 GO:0004672|GO:0006468
Bva08g01203 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 384 396 IPR008271 GO:0004672|GO:0006468
Bva08g01203 577 MobiDBLite consensus disorder prediction 165 184 - -
Bva08g01203 577 MobiDBLite consensus disorder prediction 125 153 - -
Bva08g01203 577 SUPERFAMILY Protein kinase-like (PK-like) 245 530 IPR011009 -
Bva08g01203 577 Gene3D Phosphorylase Kinase; domain 1 239 339 - -
Bva08g01203 577 PANTHER OS08G0249100 PROTEIN 148 577 - -
Bva08g01203 577 SMART serkin_6 265 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01203 577 ProSitePatterns Protein kinases ATP-binding region signature. 271 293 IPR017441 GO:0005524
Bva08g01203 577 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 148 577 - -
Bva08g01203 577 MobiDBLite consensus disorder prediction 122 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01203 Bva-Chr8 6234551 6241909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01203 248 560 Trihelix Transcription Factor Family AT1G70460 41.975 3.07e-73 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bva08g01203 PK_Tyr_Ser-Thr 1.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01203 - - zju:107425170 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01203 08 6234551 6241909 Bva11g01231 11 13007253 13009814 BWGD