Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01195 ATGATGTCACCGGAGAATAATCCTTCAAAGGCGGTGACTAAAGATGACAGCCAGGGCTCCGTTGGCCGGAAAACCGCCTCCGCTCGGCCCCCAGAGCAGGGGCTTAAGTGCCCACGATGTGACTCTCCCAACACCAAATTCTGCTACTACAACAATTACAGCCTCACGCAGCCAAGGCATTTCTGCAAGACTTGTAGAAGGTACTGGACAAAGGGTGGAGCTTTGCGTAACGTCCCAATAGGCGGTGGCTGCcggaaaaacaagaaagccAAGTCATCGTCGAGGCTCTCCGGTGACTCCGGGTCTTCTTCAGAGTTCGGGGGTCTCAAGTTTTTGCATGGTCTTTCTCCTTCGGTGGATTTTCAGCTTGGTGGGTTACCTTTTCCTAGGCTTCACCATCACCCTTCAAATACTGGTATCTATAATGAGTTCCCTTCCTTTGGGGACGTTTCTGCAACTTCTGGTTCTGTCACGAGTGCATCTTCCTGTTTCAATCTCGATCCCTCTGAAAGCAcgaattcttttaattacccattttcttcttcaattggGAATGGACTTAATGGTGCAATTCAAGGGATGAGCTCTATGAACGTTCACAGTAGCCTTGCTTCTTCAATTGAATCGTTTAGTTCTATTAACCAGGACTTGCACTGGAAGCTGCAGCAGCAGCGGTTAGGGGTGCTGTTTGGTGGCGATAACCAAAAGGATCATAGCAGCGTTTCACAAGTAAATCTTGAGAACCAAACCCAGAAACCACAACCCATTTTGTTTCAGAACCTTGAGATTTCAAAGCCAGAGATTTATGCTGTAGGGAACTCGAGAAAAGAAGGGCCAAGTGGGGACATAGCCACAGAGTGGACGTTCTTTGGGAACTCTTATACCCCGGTGACACCTACAACAACCACAAGCAGTGGTGGCAATGGGAATGATAACGTAAGCAACTGGGCTGGCGTCCATGCTTGGGGTGATATGCAGCAGCAATATAGTGCCTTGCCCTA 1001 0.4655 MMSPENNPSKAVTKDDSQGSVGRKTASARPPEQGLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKAKSSSRLSGDSGSSSEFGGLKFLHGLSPSVDFQLGGLPFPRLHHHPSNTGIYNEFPSFGDVSATSGSVTSASSCFNLDPSESTNSFNYPFSSSIGNGLNGAIQGMSSMNVHSSLASSIESFSSINQDLHWKLQQQRLGVLFGGDNQKDHSSVSQVNLENQTQKPQPILFQNLEISKPEIYAVGNSRKEGPSGDIATEWTFFGNSYTPVTPTTTTSSGGNGNDNVSNWAGVHAWGDMQQQYSALP 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01195 333 MobiDBLite consensus disorder prediction 1 24 - -
Bva08g01195 333 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 333 IPR045174 GO:0003700|GO:0006355
Bva08g01195 333 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN-RELATED 14 333 - -
Bva08g01195 333 Pfam Dof domain, zinc finger 33 89 IPR003851 GO:0003677|GO:0006355
Bva08g01195 333 MobiDBLite consensus disorder prediction 1 36 - -
Bva08g01195 333 ProSitePatterns Zinc finger Dof-type signature. 37 73 IPR003851 GO:0003677|GO:0006355
Bva08g01195 333 MobiDBLite consensus disorder prediction 80 103 - -
Bva08g01195 333 ProSiteProfiles Zinc finger Dof-type profile. 35 89 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01195 Bva-Chr8 6183135 6184774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01195 1 333 C2C2-Dof Transcription Factor Family AT5G65590 38.292 8.95e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva08g01195 zf-Dof 1.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01195 - - qsu:111999513 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01195 08 6183135 6184774 Bva11g01242 11 13066600 13068191 BWGD