Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01193 ATGGCAGCGCAACCAGAATCAGAGCATCCTAGAAAGGCAATCGGATGGGCAGCTAGGGATTCTTCTGGGGTGCTCTCTCCTTTCAAGTTCTCTAGAAGGGAAACGGGAGAGAAAGATGTGACATTCAAGGTGTTGTACTGTGGAGTATGCCACACGGATCTTCACATGGTGGAGAATGGATGGGGCTCTTCCATCTACCCACTAGTTCCTGGGCATGAGATTGTTGGGGTGGTGACTGAGGTGGGAAGCAAGGTAACAAAGTTGGAGACAAGGTCGGTGTA 281 0.5053 MAAQPESEHPRKAIGWAARDSSGVLSPFKFSRRETGEKDVTFKVLYCGVCHTDLHMVENGWGSSIYPLVPGHEIVGVVTEVGSKVTKLETRSV 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01193 93 Pfam Alcohol dehydrogenase GroES-like domain 38 89 IPR013154 -
Bva08g01193 93 Gene3D - 16 89 - -
Bva08g01193 93 PANTHER ALDEHYDE REDUCTASE 2 89 - -
Bva08g01193 93 SUPERFAMILY GroES-like 19 88 IPR011032 -
Bva08g01193 93 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Bva08g01193 93 PANTHER LOW QUALITY PROTEIN: 8-HYDROXYGERANIOL DEHYDROGENASE-LIKE 2 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01193 Bva-Chr8 6172610 6173961 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01193 1 89 Monolignol Biosynthesis Gene Families AT4G39330 67.416 2.36e-43 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01193 - K23232 lja:Lj2g3v1467630.1 167.548