Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01184 ATGGATAATTGGATATCAAGGCTTGTTCCAGTCTATGTTCTTTGCCTTTCTGTAATTTTCAGATCAGCTTCTGCAGATGAAGGATTTCTGAGCATATCATGCTGTGCAGACTCAGATTATACAGATCAAAGCACTGGCTTAATTTACACATCAGATTACACTTTGTTCTCAGATAGGACAAGTTGTAGGCACATAACAAAGCCTGTGATAAACTACACAAGCTATGATAGAGCTCGAGCATTTCATATAGATAAGGGGAAGAGATGTTTCAACTTGTCGACGGTCAAGGATCAAGTATATCTGTTAAGAGGCAGATTTCTAATTGATGAGTCATCGAGGGAGCCTCTGGATTCTCCCTTTAAAGTTTCAATTGGGGTGACACTATTAGGGGTAGTAGAACCACAGGACTTGGAAATAGAGGGAGTTTTCAGAGCCACCAAGAACTACATAGACTTCTGCTTAGTGAAGGACGAGGGAGACCCCTATATTTCACAGCTTGAATTGAGGCTATTGCCTGAAGAGTACCTACTGGGCCTGAATTCTAGTGTTTTGAAACTAATAAGCAGAAGTAATCTGGGGAATGGGAGCAGAGGAGAGATCAGGTACCCTGATGACAAAAGTGACAGAATCTGGAAGAATACTTCTACTCCATCAGCTGTTCCCTTATCATTCCTTGATGCTTACATTTCCAATCCCAGTGCTAATGTGAATGGGACACCTCCACTACAAGTCTTAAAAACTGCTGTTACCCACCCAGATCGGTTACAGTTCACACACGATGACCTGGAGAATGGGGTTTTTGAGTATCGCTTGATTCTCTACTTCCTTGAATTAAATGACACACTCAAAGCAGGCCAAAGGATGTTTGACATCTATGTCAACAACGAGATCAAAAAGAAAGGGTTTGATATAAAGGCAGAAGGGTCCAACTACAAACATACTGTTTTGAACGCTACAGCAAATGGTTCACTCAATTTAACCTTAATAAAGGCATCAGGGTCTGAGTCTGGACCCCTCTGCAATGCTTACGAGATCTTCCAGGTGCGCCCGCGGGCTGAAGAAACCAACCAAACAGACTtGGAAGTGATTTTGGGGGTGAGAGAAACGTTGCTGCTGCAAAATCAAGCCAATCAAGTGCTGGAGAGTTGGTCTGGAGACCCATGTATTCCCTTCCCCTGGCAAGGAGTAGGATGTGAAAGTTTAAGTGGTTCATATGTCATCACTCAGCTGGATCTTTCTTCAAGTAACCTCAAAGGACCGATTCCTCTCAGTGTCACTGAATTGaccaacttaaaaatattGAACTTGAGCCACAATAACTTCAATGGCAGTATCCCCCAATTTCCACATTCCTCCATGCTGACATCAGTAGATCTTAGCCACAATGACTTCATAGGATTGCTTCCAGACTCAATTACCAAACTGCCAAGTTTACAATCACTATACTTTGGCTGCAATCCCGGTTTGAGCCAAGAGAATCCATCAATAATGAACAGTTCACTCAAGACAGATTATGGAAGATGCAAATCAAAAGGGTCAAGATTTCCACAGCAAGAAATCATCATTAGCACTGTTACATGTGCATTGTTCTTGATTAGTTTGGGCATCGGggctcttttcttttgtcgttatagagaaaaattaaaaccaagcGATGGATTTGGCAGCAAAAGACACGCAATGACAACAAGCATTGCggatataattttctctttgacCAGCAAAGATGATTTCTTGAAAAATTCGGCATGTATTCAAACATATACTCTGGAATACATAGAGGCGGCTACCGAGAGCTATAAAACATTGATAGGTGAAGGAGGGTTTGGGTCTGTTTACCGGGGAGTTCTTCAAGATGGTACAGAAGTGGCAGTGAAGGTGCGCTCAGCTACATCAACTCAGGGGACTCGAGAGTTTGACAATGAGCTAAAATTGCTTTCTGAAATACGACATGAGAATCTGGTACCTCTTCTGGGTTACTGTCGTGAAAATGAGCAACAAATTCTTGTGTATCCTTTTATGTCCAATGGCTCTTTACAAGATAGACTTTATGGGGAAccggcaaaaagaaaagtattagACTGGCCAACCAGACTTTCTGTAGCTCTAGGTGCAGCTCGAGGTTTAACACATCTTCACACATTTGAGGGACGCACGGTTATACATAGGGATATAAAATCAAGCAACATACTTCTAGATCATAGCATGTGTGCTAAGGTAGCAGATTTTGGTTTCTCAAAATATGCTCCTCAAGAAGGAGACAGTGTTGCTTCTCTTGAAGTAAGAGGAACAGCAGGCTACTTGGATCCCGAGTACTATACAACCCAACAGTTATCCGCAAAAAGTGATGTATATAGCTTTGGCGTGGTTTTACTTGAAATTGTGAGTGGTCGAGAACCTATCAATATCCGCAGACCACGAAATCAGTGGAGCTTGGTTGAATGGGCTAAACCGTATATAAGGGAGTCAAAGATTGATGAAATCGTGGATCCTGGCATCAAGGGAGGATACCACGCAGAGGCAATGTGGAGAGTGGTAGAAGTAGCATATCAATGCATTGAACTCCCCTCAGCTCATCGACCATCCATGTCTGACATTGTCCGAGAGTTGGAGGATGCTCTGATTATAGAGAACAATGCATCTGAATACATGAGGTCCATAGACAGTCTTGGAGGGTCCAATCGCTACTCTATTGTCATAGAGCAAAGGGTTCCACCTTCCACTCCATCTACAACAGAATCAAACATCATGAACAAATCCTTGTCCCTCCCACAGCCGAGATA 2783 0.4136 MDNWISRLVPVYVLCLSVIFRSASADEGFLSISCCADSDYTDQSTGLIYTSDYTLFSDRTSCRHITKPVINYTSYDRARAFHIDKGKRCFNLSTVKDQVYLLRGRFLIDESSREPLDSPFKVSIGVTLLGVVEPQDLEIEGVFRATKNYIDFCLVKDEGDPYISQLELRLLPEEYLLGLNSSVLKLISRSNLGNGSRGEIRYPDDKSDRIWKNTSTPSAVPLSFLDAYISNPSANVNGTPPLQVLKTAVTHPDRLQFTHDDLENGVFEYRLILYFLELNDTLKAGQRMFDIYVNNEIKKKGFDIKAEGSNYKHTVLNATANGSLNLTLIKASGSESGPLCNAYEIFQVRPRAEETNQTDLEVILGVRETLLLQNQANQVLESWSGDPCIPFPWQGVGCESLSGSYVITQLDLSSSNLKGPIPLSVTELTNLKILNLSHNNFNGSIPQFPHSSMLTSVDLSHNDFIGLLPDSITKLPSLQSLYFGCNPGLSQENPSIMNSSLKTDYGRCKSKGSRFPQQEIIISTVTCALFLISLGIGALFFCRYREKLKPSDGFGSKRHAMTTSIADIIFSLTSKDDFLKNSACIQTYTLEYIEAATESYKTLIGEGGFGSVYRGVLQDGTEVAVKVRSATSTQGTREFDNELKLLSEIRHENLVPLLGYCRENEQQILVYPFMSNGSLQDRLYGEPAKRKVLDWPTRLSVALGAARGLTHLHTFEGRTVIHRDIKSSNILLDHSMCAKVADFGFSKYAPQEGDSVASLEVRGTAGYLDPEYYTTQQLSAKSDVYSFGVVLLEIVSGREPINIRRPRNQWSLVEWAKPYIRESKIDEIVDPGIKGGYHAEAMWRVVEVAYQCIELPSAHRPSMSDIVRELEDALIIENNASEYMRSIDSLGGSNRYSIVIEQRVPPSTPSTTESNIMNKSLSLPQPR 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01184 927 CDD STKc_IRAK 604 871 - -
Bva08g01184 927 ProSiteProfiles Leucine-rich repeat profile. 430 452 IPR001611 GO:0005515
Bva08g01184 927 ProSitePatterns Protein kinases ATP-binding region signature. 604 626 IPR017441 GO:0005524
Bva08g01184 927 Gene3D Transferase(Phosphotransferase) domain 1 674 886 - -
Bva08g01184 927 SMART serkin_6 598 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01184 927 MobiDBLite consensus disorder prediction 904 927 - -
Bva08g01184 927 SUPERFAMILY L domain-like 377 489 - -
Bva08g01184 927 PANTHER OS07G0107800 PROTEIN-RELATED 72 888 - -
Bva08g01184 927 Gene3D Ribonuclease Inhibitor 357 508 IPR032675 -
Bva08g01184 927 PANTHER OS05G0525400 PROTEIN 72 888 - -
Bva08g01184 927 Gene3D Phosphorylase Kinase; domain 1 567 673 - -
Bva08g01184 927 ProSiteProfiles Protein kinase domain profile. 598 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01184 927 Pfam Protein tyrosine and serine/threonine kinase 602 870 IPR001245 GO:0004672|GO:0006468
Bva08g01184 927 SUPERFAMILY Protein kinase-like (PK-like) 582 870 IPR011009 -
Bva08g01184 927 Pfam Malectin-like domain 34 348 IPR024788 -
Bva08g01184 927 ProSitePatterns Serine/Threonine protein kinases active-site signature. 720 732 IPR008271 GO:0004672|GO:0006468
Bva08g01184 927 Gene3D - 186 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01184 Bva-Chr8 6098458 6103362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01184 8 877 Receptor kinase-like Gene Family AT1G67720 33.630 3.21e-139 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bva08g01184 Malectin_like 2.6e-47 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01184 - - gmx:100781986 1226.08