Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01177 ATGTCTACATCGGCACCGGTTGCCGAGGAGGGGCAGAGCAACGTCTCAACAGTTGCATCTTCCGTATCCTCAGACTTTGTCTCTCAGAATGGGACTGGATTGAAAGAACGCAATTACCTAGGATTGTCAGATTGTTCATCAGTCGACAGTTCTAGTTACCCAAGCTTGTCTGATGAGAAAAAAGACAACTTGAATTTGAAGGCTACAGAATTACGGTTGGGTCTTCCTGGATCCCAGTCTCCTGGGAGGGAAGGAGATCTTTACTTGTCGAGCTCAAAAAACCTTGATGAGAAGCCACTCTTTCCTTTGCTTCCTACAAAAGATGGAATATGTTCATCCTCACAGAAGACAATCGTTTCAGGAAACAAAAGAGGATTCTCTGACACCATAGATGTGTTTTCTGGGGGTAAATTTCCCGGTAATTCAGGGGTAAATGCAATGCTATCTCCTAGACCTTCTGGAGCTCAGCCGAATGTAATGAAAGAGATGCCAAGCAAGGTTGTGCAGGAACGGCCTTCTGCTGCTAATGGGGCTGGTTATGACCATGTAGATGCTTCTATCACCAACAGTGCACCAGCTGCTAAGGCACAAGTTGTTGGTTGGCCTCCTATAAGATCATATAGGAAGAATTCATTGGCCACTAGTTCAAAGAACAATGAGGAAGTTGATGGAAAACCAGGTCCTGCTGCTCTCTTTGTGAAGGTCAGTATGGATGGCGCTCCTTATTTGAGGAAGGTAGATCTAAGAAGTTATTCGACATACCAAGAACTATCTTCTGCCCTTGAGAAGATGTTCAGCTGTTTTACCCTAGGTCAGTGCGGCTCTCATGGAGCTCCAGGAAGAGAAATGTTGAGTGAGAGTAAGTTAAGGGACCTTCTGCATGGATCAGAATATGTACTTACTTATGAAGATAAAGACGGTGACTGGATGCTTGTAGGGGATGTGCCATGGGAGATGTTCATTGACACATGCAAGAGGCTGAAAATCATGAAGGGATCCGATGCCATTGGCTTGGCTCCAAGGGCCATGGAGAAATCCAAGAGAAGCTATTTGTCTGAAGGAGTTGAATGTTTGTTTCTATCTTTGGCTTCAAGGTACATGTCTTCAAGATACTTGTCCGAGAATGGCATGTACATTTCTGAGTACCTATCTGATGTGGTTGGGAATGGTGTCATCTTAAAATCTAATGCACTTGCCTCAACAACTCTTCAAAGCACTGATAATATAGAGCATCTTTCTTG 1241 0.4424 MSTSAPVAEEGQSNVSTVASSVSSDFVSQNGTGLKERNYLGLSDCSSVDSSSYPSLSDEKKDNLNLKATELRLGLPGSQSPGREGDLYLSSSKNLDEKPLFPLLPTKDGICSSSQKTIVSGNKRGFSDTIDVFSGGKFPGNSGVNAMLSPRPSGAQPNVMKEMPSKVVQERPSAANGAGYDHVDASITNSAPAAKAQVVGWPPIRSYRKNSLATSSKNNEEVDGKPGPAALFVKVSMDGAPYLRKVDLRSYSTYQELSSALEKMFSCFTLGQCGSHGAPGREMLSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKGSDAIGLAPRAMEKSKRSYLSEGVECLFLSLASRYMSSRYLSENGMYISEYLSDVVGNGVILKSNALASTTLQSTDNIEHLS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01177 413 SUPERFAMILY CAD & PB1 domains 228 331 - -
Bva08g01177 413 ProSiteProfiles PB1 domain profile. 230 334 IPR000270 GO:0005515
Bva08g01177 413 Gene3D - 227 344 - -
Bva08g01177 413 MobiDBLite consensus disorder prediction 1 32 - -
Bva08g01177 413 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 21 344 IPR003311 GO:0005634|GO:0006355
Bva08g01177 413 Pfam AUX/IAA family 69 341 IPR033389 -
Bva08g01177 413 PANTHER AUXIN-INDUCED PROTEIN 21 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01177 Bva-Chr8 6050326 6055364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01177 232 335 B3 DNA Binding Superfamily AT5G37020 33.654 5.90e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bva08g01177 AUX_IAA 3.6e-91 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01177 K14484 - gmx:547502 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01177 08 6050326 6055364 Bva11g01261 11 13182842 13186578 BWGD