Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01151 ATGGCTTTGGAAACTCTTCCATCTAATGAGTTTTTCAACTTCATCATCTATGATACTATCTCTGCTACTCCATTTAGCAGCCATGAAGCTTCAGAGCCAGAGGCTAGTTTCTTAATTGAAAACAGGGTAAAACATCAGGAACCTGATCCTGTGTCTGATATTTCTGCACGAAAACGCCAAGCTTGTGAACCAGAAGCCATTAGGCGGGGCCAGAATTTTGGTGCGCAagggaggaagaagaggaaaaggaagcCCAGGATTTGTAAGAACAAGGAGGAGGCTGAGACGCAAAGAATGACCCACATTACTGTAGAAAGAAACCGCCGAAAGCAGATGAACGAGCATCTTGCTGTCCTGCGTTCACTCATGCCTGAATCCTACGTCCAAAGGGGTGACCAGGCCTCAATAGTTGGTGGAGCTATAGATTTTGTGAAGGATCTTGAGCACCTCTTGCAGTCACTTGAAGCTCAGAAGTTGCAGTTTCTACAGGGAAGAGTAGCTCTAGTTCATGAGGATAAGGCTATGAAACCTCCATTTTCACAATTCTTTGTGTATCCTCAGTACACATGGTCTCAGGTTCCTAACAAATATACAGCAAAGACCAAGGCTGCTATTGCCGATATTGAGGTTACTTTAATTGAGACTCATGCAAACCTTCGAATTCTGTCCAGGAAAACCCCCAGACAGCTAATAAAACTGGTTGCTGGTTTTCAAGCACTATACCTTACCATTCTACATCTCAATGTCACCACCATGGACCCATTAGTACTCTATTCTATCAGTGCAAAGGTTGAAGAAGGATGCCAACTTGGTTCAGTTGATGACATTGCTACTGCAGCTCACCACTTGCTTAGTAGAATTGAGGAAGAGGCTTCTCTACTGTGCTGTTG 890 0.427 MALETLPSNEFFNFIIYDTISATPFSSHEASEPEASFLIENRVKHQEPDPVSDISARKRQACEPEAIRRGQNFGAQGRKKRKRKPRICKNKEEAETQRMTHITVERNRRKQMNEHLAVLRSLMPESYVQRGDQASIVGGAIDFVKDLEHLLQSLEAQKLQFLQGRVALVHEDKAMKPPFSQFFVYPQYTWSQVPNKYTAKTKAAIADIEVTLIETHANLRILSRKTPRQLIKLVAGFQALYLTILHLNVTTMDPLVLYSISAKVEEGCQLGSVDDIATAAHHLLSRIEEEASLLCC 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01151 296 Gene3D - 88 163 IPR036638 GO:0046983
Bva08g01151 296 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 96 147 IPR011598 GO:0046983
Bva08g01151 296 SMART finulus 102 153 IPR011598 GO:0046983
Bva08g01151 296 CDD bHLH_AtFAMA_like 99 158 - -
Bva08g01151 296 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 95 166 IPR036638 GO:0046983
Bva08g01151 296 PANTHER TRANSCRIPTION FACTOR BHLH71 1 293 - -
Bva08g01151 296 PANTHER MAX DIMERIZATION, MAD 1 293 - -
Bva08g01151 296 Pfam Helix-loop-helix DNA-binding domain 97 148 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01151 Bva-Chr8 5901558 5903390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01151 88 264 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 58.242 1.13e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva08g01151 HLH 4.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01151 - - pvu:PHAVU_003G284500g 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01151 08 5901558 5903390 Bva08g01151 08 5901558 5903390 ECH