Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva08g01135 | ATGAGCTTTCAGGATATTGAAGCTGGCAGGCCTTTCGCTTCGAGGCGAGACCTTATCAATGGCAAGCAAGACCCTACACAAGCGGTGGCTTCCGGCATATTTCAGATCAACACAGCCGTGTCTACATTTCAGAGGCTCGTCAACACCCTTGGAACCCCGAAAGACACCCTGGAGCTACGCGAGAAGCTGCGCAAGACAAGACTACATATTGGGCAGTTGGTGAAGGATACATCAGCTAAACTCAAGCAAGCTAGTGACATAGATCACCATGTTGGAGTTAATGCGAGCAAGAAGATTGCGGATGCTAAACTTGCTAAAGATTTTCAGGCAGTGCTGAAAGAATTTCAGAAGGCACAGCGGCTTGCagcagagagagaaacagCTTACACTCCATTTGTTCCACAAGCGGTTCTTCCCTCCAGCTATACAGCTAGTGAGATTGATATAAGTTCTGATAAAACAGCAGAACAACGCGCTCTTCTTGTGGAGTCTAGAAGGCAGGAggttttattattagataatgAGATTGCCTTCAACGAGGCTATCattgaagaaagagaacaagGTATTCAAGAAATTCAGCAGCAAATTGGTGAAGTAAATGAGATTTTCAAAGATCTAGCCGTGCTTGTTCATGAGCAAGGAGCTATGATTGATGATATTAGTTCCAACATCGAGAATTCACACGCAGCAACTGCTCAAGGAAAATCTCAACTTGTGAAAGCTGCAAAGACCCAAAGATCAAATTCATCTCTGacaTGTTTGCTCTTGGTGATTTTTGGGATTGTGCTCCTCATCGTGATCATAGTTCTCGCGGCTTA | 821 | 0.4202 | MSFQDIEAGRPFASRRDLINGKQDPTQAVASGIFQINTAVSTFQRLVNTLGTPKDTLELREKLRKTRLHIGQLVKDTSAKLKQASDIDHHVGVNASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTASEIDISSDKTAEQRALLVESRRQEVLLLDNEIAFNEAIIEEREQGIQEIQQQIGEVNEIFKDLAVLVHEQGAMIDDISSNIENSHAATAQGKSQLVKAAKTQRSNSSLTCLLLVIFGIVLLIVIIVLAA | 273 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva08g01135 | 273 | ProSitePatterns | Syntaxin / epimorphin family signature. | 186 | 225 | IPR006012 | GO:0005484|GO:0006886|GO:0016020 | |
Bva08g01135 | 273 | Gene3D | - | 20 | 133 | - | - | |
Bva08g01135 | 273 | PANTHER | SYNTAXIN | 2 | 272 | IPR045242 | - | |
Bva08g01135 | 273 | SUPERFAMILY | t-snare proteins | 23 | 235 | IPR010989 | GO:0016020|GO:0016192 | |
Bva08g01135 | 273 | Pfam | Syntaxin-like protein | 30 | 129 | IPR006011 | GO:0016020 | |
Bva08g01135 | 273 | CDD | SNARE_Qa | 200 | 241 | - | - | |
Bva08g01135 | 273 | SMART | tSNARE_6 | 175 | 242 | IPR000727 | - | |
Bva08g01135 | 273 | PANTHER | SYNTAXIN OF PLANTS PROTEIN | 2 | 272 | - | - | |
Bva08g01135 | 273 | Pfam | SNARE domain | 217 | 268 | IPR000727 | - | |
Bva08g01135 | 273 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 180 | 242 | IPR000727 | - | |
Bva08g01135 | 273 | CDD | SynN | 23 | 148 | IPR006011 | GO:0016020 | |
Bva08g01135 | 273 | Gene3D | - | 173 | 273 | - | - | |
Bva08g01135 | 273 | SMART | SynN_4 | 15 | 127 | IPR006011 | GO:0016020 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva08g01135 | Bva-Chr8 | 5827766 | 5831177 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva08g01135 | 1 | 261 | SNARE and Associated Proteins | AT5G46860 | 79.310 | 5.00e-149 | 416 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva08g01135 | - | K08488 | gmx:547656 | 412.535 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva08g01135 | 08 | 5827766 | 5831177 | Bva08g01135 | 08 | 5827766 | 5831177 | ECH |