Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01128 ATGTATGGGGATTGCCAAGTTATGTCAACCATGGGAGGGAACGTAGTGGTGAACGCAGAAACCCTCTTCTCCTCGTCGATCCAAAACCCTAACTTCAACTTCATGCCAACCATGCCTTTCCAGTCCTTCTCATCCATGGCTCCTaaagaagaagatgggATCTTGAGAGGGAAGGAGGAGATGGACAGTGGGTCTGGTAGTGAGCACGTTGAAGAGAAATCTGGGAATGAGCAAGACATGAGTGAACAGCCAACTAAGAAGAAACGTTATCACAGGCACACAGCTCGCCAGATCCAAGAAATGGAAGCTTTGTTCAAGGAATGTCCACACCCAGACGATAAGCAGAGGATGAAACTGAGCCAAGAGTTAGGCCTAAAACCACGCCAGGTTAAGTTCTGGTTTCAAAATCGTCGAACCCAGATGAAGGCACAACAAGATCGGGCAGATAATGCGATACTTAGGGCTGAGAATGAGAACCTAAAAACTGAGAACTATCGTTTACAAGCAGCACTTCGCAATATTATCTGTCCCAATTGTGGTGGTCAAGCCATTATGGGTGCTGAACTTGGCCTGGATGAGCAGCAGCTCCGCCTTGAAAATGCCCGGCTACGAGAAGAGCTAGAACGAGTATGTTGTCTCACTTCAAGATTCACTGGCCGCCCAATGCAAACAATATCTGCAGCTCCTCCTCCTCTTGTAGCTCCTTCGTTGGAATTGGACATGAACATATACTCAAGGCACTTTGCGGATCCTATGCCTTCATGTACAGAAATGATTCCTGTGCCGATGTTGCCCCCTGAACCTTCATCATTTCCCGAAGGTGGTCTGCTAATGGAAGAAGAGAAGTCTCTGGCAATGGAGCTTGCAAGGTCCTCCATGGATGAACTTATCAAGATGTGTCGGGCAACTGACCCACTTTGGATCACAAGTAATGAGAATGAAAGGGAAATGCTTAATCTTGAGGAGTATGCGAGGTTGTTTCCTTGGCCTTTGAACCTCAAGCACCATTCAAATGAGCTCAGGACAGAAGCTAGCCGTGACACTGCTGTGGTTATAATGAATAGCATCACCCTCGTTGATGCGTTCCTTGATGCTCTTAAGTGGATGGAGTTGTTTCCTACAATTGTTTCTAGAGCAAAAACTGTTCAGGTTATATCTTCTGGAGCTTCTGGTCATGCAACTGGGTCTCTTCAATTGATGTACGCCGAATTGCAAGTTATTTCTCCCTTGGTGTCCACTAGAGAGACTCATTTCCTTCGTTTTTGCCAACAAAATGCTGAGGAGGGAACCTGGGTTATCGTTGATTTTCCTATAGATAGCTTTCAGGAAAATTTTCACCCTACTTATCCCAATTACCGTAGAAGGCCCTCTGGTTGTATCATTCAAGATATGCCAAATGGGTACTCAAGGGTAACCTGGGTTGAGCATGCAGAAGTAGAGGAGAAACCAGTCCATCAGATATTCAGTAACTACGTATACAGTGGGATGGCATTTGGAGCTCAACGCTGGTTAGGAGTTTTGGGAAGACAATGCGAGAGGGTTGCAAGCCTCATGGCCAGGAACATATCCGACCTTGGAGTAATACCCTCACCAGAAGCGCGAAAGAACTTGATGAAGCTGGCCCAAAGAATGATAAGAATGTTTAGCCAGAACATGAGCACCTCTGGTGGTCAATCATGGACAGCCATATCAGATTCCCCTGAAGACACTGTTAGAATCACAACCAGGAAGATAACAGAGCCCGGCCAACCTAATGGGGTCATTCTCAGTGCCATCTCCACCACCTGGCTCCCCTATTCTCACACCCACATCTTTGATCTCCTCAGAGACGAACGCCGCAGATCTCAGCTGGATGTCCTTTCCAATGGGAATTCATTGCATGAAGTGGCTCATATAGCAAATGGCTCACATCCTGGCAACTGCATTTCCCTTCTGCGTATAAATGTAGCTAGCAACTCATCCCAGAACGTCGAGCTGATGCTTCAAGAGAGCTGCACTGACCAATCCGGCAGCCTAGTAGTCTACACCACAATCGATGTGGACTCCATTCAGCTAGCAATGAGCGGAGAAGATCCTTCCAGCATTACCCTTCTTCCTCAGGGGTTCATGATAGTGCCAATGGCTTCAACTAGCTTGGACACAAGCAACAATGCCATGGATGGAAAAAATTCTTCTGAATCTGGAAGTAGATCCGCTGGCACTGTGAATTCAGGTTGCCTTTTAACTGTGGGGCTGCAAGTTCTGGCAAGCACAATCCCTTCTGCAAAGCTCAACCTTTCCAGCGTGACAGCAATCAATAACCATCTCTGCAACACTCTGCACCAAATTGAAGCTGCTCTGTGCAACACCAGCAACGGTGGCTTCCTTGGGTCTTGCACTGAACCCACAACTAGTGCACCCCCAAAGCAATA 2411 0.4687 MYGDCQVMSTMGGNVVVNAETLFSSSIQNPNFNFMPTMPFQSFSSMAPKEEDGILRGKEEMDSGSGSEHVEEKSGNEQDMSEQPTKKKRYHRHTARQIQEMEALFKECPHPDDKQRMKLSQELGLKPRQVKFWFQNRRTQMKAQQDRADNAILRAENENLKTENYRLQAALRNIICPNCGGQAIMGAELGLDEQQLRLENARLREELERVCCLTSRFTGRPMQTISAAPPPLVAPSLELDMNIYSRHFADPMPSCTEMIPVPMLPPEPSSFPEGGLLMEEEKSLAMELARSSMDELIKMCRATDPLWITSNENEREMLNLEEYARLFPWPLNLKHHSNELRTEASRDTAVVIMNSITLVDAFLDALKWMELFPTIVSRAKTVQVISSGASGHATGSLQLMYAELQVISPLVSTRETHFLRFCQQNAEEGTWVIVDFPIDSFQENFHPTYPNYRRRPSGCIIQDMPNGYSRVTWVEHAEVEEKPVHQIFSNYVYSGMAFGAQRWLGVLGRQCERVASLMARNISDLGVIPSPEARKNLMKLAQRMIRMFSQNMSTSGGQSWTAISDSPEDTVRITTRKITEPGQPNGVILSAISTTWLPYSHTHIFDLLRDERRRSQLDVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDQSGSLVVYTTIDVDSIQLAMSGEDPSSITLLPQGFMIVPMASTSLDTSNNAMDGKNSSESGSRSAGTVNSGCLLTVGLQVLASTIPSAKLNLSSVTAINNHLCNTLHQIEAALCNTSNGGFLGSCTEPTTSAPPKQ 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01128 803 MobiDBLite consensus disorder prediction 57 86 - -
Bva08g01128 803 CDD homeodomain 87 145 IPR001356 GO:0003677
Bva08g01128 803 ProSiteProfiles 'Homeobox' domain profile. 84 144 IPR001356 GO:0003677
Bva08g01128 803 SMART START_1 287 513 IPR002913 GO:0008289
Bva08g01128 803 MobiDBLite consensus disorder prediction 57 94 - -
Bva08g01128 803 CDD START_ArGLABRA2_like 282 512 - -
Bva08g01128 803 PANTHER - 60 787 - -
Bva08g01128 803 Coils Coil 138 170 - -
Bva08g01128 803 Gene3D - 71 158 - -
Bva08g01128 803 SUPERFAMILY Bet v1-like 279 515 - -
Bva08g01128 803 SUPERFAMILY Bet v1-like 539 777 - -
Bva08g01128 803 Pfam Homeodomain 87 142 IPR001356 GO:0003677
Bva08g01128 803 ProSiteProfiles START domain profile. 278 516 IPR002913 GO:0008289
Bva08g01128 803 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 60 787 IPR042160 -
Bva08g01128 803 SMART HOX_1 85 148 IPR001356 GO:0003677
Bva08g01128 803 Pfam START domain 288 513 IPR002913 GO:0008289
Bva08g01128 803 ProSitePatterns 'Homeobox' domain signature. 119 142 IPR017970 GO:0000981|GO:0006355
Bva08g01128 803 Gene3D - 333 499 IPR023393 -
Bva08g01128 803 SUPERFAMILY Homeodomain-like 69 145 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01128 Bva-Chr8 5796033 5801133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01128 8 783 Homeobox Transcription Factor Family AT5G46880 57.467 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bva08g01128 START 3.3e-40 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01128 - - gmx:100812829 1290.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01128 08 5796033 5801133 Bva08g01128 08 5796033 5801133 ECH
Bva08g01128 08 5796033 5801133 Bva03g01439 03 13682307 13690361 ECH