Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01125 ATGAGAGCTCCTCGGATGCGTTGGACAACTACACTCCATGCTCGCTTTGTTCATGCTGTTGAGCTATTGGGTGGCCATGAAAGGGCAACACCCAAATCAGTTCTTGAGCTTATGGATGTGAAGGATCTCACTTTAGCCCATGTTAAATCCCATTTACAgATGTACCGGACGGTAAAGACCACAGATAAAGCAGCAGCTACCTCAGGGCAATCAGATGTATATGATAATGGGTCTTCTGGAGATACATCTGAGGACTTAATGTTCGACATGAACAACTCAAGCTGCAGGTCTGATTTATCTGTTAAGCAGGGAAGATCAACTTCTAATCAAGATAAGGAGTATCACGGGCTTTGGAGCAATTCTTCAAGGGAAGCTTGGTTGCATGGGAAGCCAAACATCATTGGTTCTGTTGGAAATGTGCCTTCACTTGATCAGAAGGAAATGGATCCGAAGAGTCTAAGTTATGAGAGATTATCTGATGGAAGCTCGTCCTCAAACATTTCAGGAACAAGCCCAAAGAAGCCTAATCTAGATTTGGAGTTCACCTTGGGGCAGCCAGCATTAATTTG 569 0.4394 MRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKAAATSGQSDVYDNGSSGDTSEDLMFDMNNSSCRSDLSVKQGRSTSNQDKEYHGLWSNSSREAWLHGKPNIIGSVGNVPSLDQKEMDPKSLSYERLSDGSSSSNISGTSPKKPNLDLEFTLGQPALI 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01125 189 MobiDBLite consensus disorder prediction 137 178 - -
Bva08g01125 189 Gene3D - 3 60 - -
Bva08g01125 189 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Bva08g01125 189 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 4 57 IPR006447 GO:0003677
Bva08g01125 189 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 187 IPR044847 GO:0000976|GO:0006355|GO:0010158
Bva08g01125 189 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 187 - -
Bva08g01125 189 SUPERFAMILY Homeodomain-like 2 58 IPR009057 -
Bva08g01125 189 MobiDBLite consensus disorder prediction 156 175 - -
Bva08g01125 189 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 60 IPR017930 -
Bva08g01125 189 MobiDBLite consensus disorder prediction 61 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01125 Bva-Chr8 5766200 5771084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01125 1 188 G2-like Transcription Factor Family AT4G17695 50.000 5.47e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva08g01125 Myb_DNA-binding 5.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01125 - - aprc:113868756 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01125 08 5766200 5771084 Bva11g01311 11 13434189 13439032 BWGD