Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01116 ATGGATGGAAAATCAGAGCAAGAACAAGAAGCTCTCCACCTCAAAGGCCTTGCAGAAGCAAAGTTCAAAAGTTCCAATCTAAAATCAGCTCTGAAATATGCCGAGCGAGCTCACAGTCTCGCCCCAAACCTCGATGGCATCTTCGAAATGGTCACCTCCTTCAAGATCCTGCGCATCGCTTCGGACTCATCCCCACGTGACTGGTACAAAATACTGCAAGTCGAGCCTTTTGCTCACACAAACACCATTAGAAAGCAGTACAAGAAGCTAGCTTTACTTCTTCACCCGGATAAGAACCCCCATGTGGGTTCCGAGGAGGCATTCAAGGTTGTGGGCGAGGCATTCCGATTTCTATGCGATAAAATTCGAAGGAAAGAATACGATTTAAAGTTGAGGATTCGGATGCAGGAGGAGGCGGTTGAAGCTTCGAAGGAGGGGCCCGAGGGGGAAACTTTCTGGACGGCGTGCTCTACTTGCCGATTGCTGCACCAGTTCGAAAGGAGGTATGTGGGTCAAAATTTAGTTTGTCCTAGCTGCAAGATGAGTTTTAATGCTGTGGAGGTTGAGAATAGTGGGTCTGAGGAGGAGCAAGAGGAGAAAACGAGGGATAGAAATAGAAGTAGCAGGTTGAGGGTTACAAAATCGAAACAGAAGGTGGCTAGCTTCCAGAAAAATGGGGACTTGAGCTTGAAGAGGAAAATGGATAGTGTGAAGGCGAAAGTGAGTAGTGAAGAAGTTGAAGGTGTAACCACCAGAAGTGGAATTTTAAAGCGTAAACTCGGGGGTGAATTGAGAATTGGGGATTTGGAGAGGGAAGGAGCTGTTGGTGGATGGGATAGTGGAAGATTGAGGAATGGGGGCTCGAGGAGGAGAATGAGTACATTTGGGGAAGTGTTGGAAAGGTCTAAACCCAAGAGGGTTAAAGCTGAGGAGGAAACGATGACATTGGCAGAAATGCGAGATGAAGTTAAGAGAAAGGCGCAGCAACAGAGGATGAAGGTCATGAAACTGAAGCTAAAGGACAAGGACGAGGATAAAACTGAGAAAAGCAAGCAGGAGAAAAGTCATGTGGTGTCAACGAATAGTAGGGGTATACTGGTGTATAAACGAAGAACTTTGAAGAAGAGTGTGAAGCTAGAAATCAAGGAGAAAGCTTCAATTAAGACTAAGGGATCTAAAATTGGAAAGAACAGGGACTCAAGTGAAGGAGACCTGGAAGTCATGCCGGTGGAGGATTCagatttttatgattttgacAAAGATAGAGTAGAGAAGAGTTTTAAGAAAGGGCAAGTCTGGGCTGcctatgatgatgatgatggaatGCCGAGGCATTATGCTTTGATTGATGAAGTTCTTTCACTAAATCCTTTTGAAGTGAGAATAAGTTGGATAGATCTGCAAAACAATGGGGATGAGAAGATAATTAATTGGGAGAAAATGGGGTTCCATATGTCTTGTGGGAGATTTAAAGTTTCCTGGAAGACTCCAATAAACTCAGTTAATGTCTTCTCTCATGTTGTGGATTGTGAACGAGTAGCACGTGAAATTTACAGAATTTATCCAAAGAAGGGTTCTGTGTGGGCACTTTATAATGAGGCGGCTCATGATGCGGAGGGAAGAAATATTGCAGCTGAGAAGAGATGCTACTACATTGTTGTATTTTTGACCAGTTACAGTGAGACGACTGGTTTAAGCATGGCATATCTTGAGAAGGTTGATGGatacaaaacaatatttaagAGACGAGAGATTGGGAGTCATGCAATTAGGTTtcttgaagaaaatgatatacGGTTGATTTCACATCAGATTCCTGCGCAGAAGCTTTCAGGTCATGAGATTAATGATGTTTTGGAGGACTGTTGGGAACTTGATCCAGCTTCACTTCCTTCAGATTTACTCACTATTGGGGAGCTTTA 1922 0.4256 MDGKSEQEQEALHLKGLAEAKFKSSNLKSALKYAERAHSLAPNLDGIFEMVTSFKILRIASDSSPRDWYKILQVEPFAHTNTIRKQYKKLALLLHPDKNPHVGSEEAFKVVGEAFRFLCDKIRRKEYDLKLRIRMQEEAVEASKEGPEGETFWTACSTCRLLHQFERRYVGQNLVCPSCKMSFNAVEVENSGSEEEQEEKTRDRNRSSRLRVTKSKQKVASFQKNGDLSLKRKMDSVKAKVSSEEVEGVTTRSGILKRKLGGELRIGDLEREGAVGGWDSGRLRNGGSRRRMSTFGEVLERSKPKRVKAEEETMTLAEMRDEVKRKAQQQRMKVMKLKLKDKDEDKTEKSKQEKSHVVSTNSRGILVYKRRTLKKSVKLEIKEKASIKTKGSKIGKNRDSSEGDLEVMPVEDSDFYDFDKDRVEKSFKKGQVWAAYDDDDGMPRHYALIDEVLSLNPFEVRISWIDLQNNGDEKIINWEKMGFHMSCGRFKVSWKTPINSVNVFSHVVDCERVAREIYRIYPKKGSVWALYNEAAHDAEGRNIAAEKRCYYIVVFLTSYSETTGLSMAYLEKVDGYKTIFKRREIGSHAIRFLEENDIRLISHQIPAQKLSGHEINDVLEDCWELDPASLPSDLLTIGEL 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01116 640 MobiDBLite consensus disorder prediction 195 210 - -
Bva08g01116 640 Pfam DnaJ domain 67 128 IPR001623 -
Bva08g01116 640 Coils Coil 309 340 - -
Bva08g01116 640 CDD DnaJ 67 120 IPR001623 -
Bva08g01116 640 Pfam Domain of unknown function (DUF3444) 407 613 IPR024593 -
Bva08g01116 640 Gene3D DnaJ domain 56 148 IPR036869 -
Bva08g01116 640 MobiDBLite consensus disorder prediction 338 358 - -
Bva08g01116 640 PRINTS DnaJ domain signature 103 123 IPR001623 -
Bva08g01116 640 PRINTS DnaJ domain signature 69 87 IPR001623 -
Bva08g01116 640 PRINTS DnaJ domain signature 87 102 IPR001623 -
Bva08g01116 640 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Bva08g01116 640 SMART dnaj_3 66 123 IPR001623 -
Bva08g01116 640 MobiDBLite consensus disorder prediction 338 356 - -
Bva08g01116 640 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 7 638 - -
Bva08g01116 640 SUPERFAMILY Chaperone J-domain 60 132 IPR036869 -
Bva08g01116 640 PANTHER BNAC03G44070D PROTEIN 7 638 - -
Bva08g01116 640 MobiDBLite consensus disorder prediction 188 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01116 Bva-Chr8 5694271 5697049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01116 1 188 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.542 2.64e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01116 - - jre:109002128 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01416 11 13951138 13954692 Bva08g01116 08 5694271 5697049 BWGD