Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01115 ATGGGTAGCAGTGAGATGGATAAaaccccaaaagaaaaggagtcAAAGACACCTCCTACTACGTCACAGGAGCAATCTACAACCACTAGCACTGGAGCAATTAACACTGACTGGTCTAGTTTTCAGGCATATTCTCCTATACCTCCACATGGGTTTTTGGCGTCAAGTCCCCAAGCCCACCCTTATATGTGGGGTGTACAGCATATTATGCCTCCATATGGTACGCCACCACATCCGTATGTTGCAATGTATCCCCATGGTGGCATATATGCTCATCCATCCATGCCTCCGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTTCTCCAAATGGTATTGCTGAGGCTTCAGGAAATACTCCTGGCAACATGGAAGCTGATGGTAAACCTCCTGAGGTGAAGGAAAAATTGCCTATCAAAAGATCAAAGGGAAGTTTGGGTAGTTTGAATATGATTACAGGGAAGAATAATGAACTTGGTAAAACACCAGGGACATCTGCGAATGGAATTCATACAAAAAGTGGTGAGAGTGCAAGTGATGGATCTAGTGAAGGAAGTGATGCAAATTCTGACAGTGAATCTCCAATGAAATCAGGGGGCAGGCAGGATTCTTTGGAAGATGAGCCATCTCAAAATGGTGGTTCGGTGCATGCTCCTCAAAACGGGGGACCTAATACTCCTCGAACAATGGTAAATCAATCTATGGCTGTTGTGCCCATCTCTGCGGCTGGTGTTCCAACAGCCATTCCTGGTCCCACCACAAACTTGAACATAGGAATGGATTATTGGGGCACGCCAACTCCATCTACTATTCCTTTGCGTGGAAAGGTTCCTTCTACTGCAGTTGCTGGTGGGATGGTTACTGCTGGATCACGTGATAGTGTCCAGTCACAACTTTGGATACAGGATGAAAGAGAGCTTAAAAGGCAAAGGCGGAAGCAGTCTAATAGGGAATCTGCTCGCAGATCAAGGTTGCGCAAACAGGCAGAATGTGATGAACTAGGCCAACGTGCTGAGgctttgaaagaagaaaatgcgACACTCCGATCAGAAGTGAGTCGGATCAGGAGTGAGTATGAGCAGCTGCTCTCAGAGAATGCTGCCCTCAAGGAGAGACTCGGGGAAGTACCTGGAAAGGAGGATATCAGGTCTGGCAGGAGTGATCAACATTGCGGTAATGACACTCAACAACAGACTGGGCAAACAGAGGCTGTGCAGGATGGTAATTA 1229 0.454 MGSSEMDKTPKEKESKTPPTTSQEQSTTTSTGAINTDWSSFQAYSPIPPHGFLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSMPPGSYPFSPFAMPSPNGIAEASGNTPGNMEADGKPPEVKEKLPIKRSKGSLGSLNMITGKNNELGKTPGTSANGIHTKSGESASDGSSEGSDANSDSESPMKSGGRQDSLEDEPSQNGGSVHAPQNGGPNTPRTMVNQSMAVVPISAAGVPTAIPGPTTNLNIGMDYWGTPTPSTIPLRGKVPSTAVAGGMVTAGSRDSVQSQLWIQDERELKRQRRKQSNRESARRSRLRKQAECDELGQRAEALKEENATLRSEVSRIRSEYEQLLSENAALKERLGEVPGKEDIRSGRSDQHCGNDTQQQTGQTEAVQDGN 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01115 409 CDD bZIP_plant_GBF1 309 359 IPR045314 GO:0003700|GO:0006355
Bva08g01115 409 Pfam bZIP transcription factor 304 366 IPR004827 GO:0003700|GO:0006355
Bva08g01115 409 Coils Coil 324 372 - -
Bva08g01115 409 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 311 326 IPR004827 GO:0003700|GO:0006355
Bva08g01115 409 SMART brlzneu 304 368 IPR004827 GO:0003700|GO:0006355
Bva08g01115 409 MobiDBLite consensus disorder prediction 115 234 - -
Bva08g01115 409 MobiDBLite consensus disorder prediction 389 409 - -
Bva08g01115 409 MobiDBLite consensus disorder prediction 370 409 - -
Bva08g01115 409 Pfam Disordered region downstream of MFMR 135 272 - -
Bva08g01115 409 SUPERFAMILY Leucine zipper domain 307 363 IPR046347 GO:0003700|GO:0006355
Bva08g01115 409 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 406 IPR044827 GO:0003700|GO:0006355|GO:0043565
Bva08g01115 409 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 406 - -
Bva08g01115 409 MobiDBLite consensus disorder prediction 1 18 - -
Bva08g01115 409 MobiDBLite consensus disorder prediction 305 332 - -
Bva08g01115 409 Gene3D - 307 361 - -
Bva08g01115 409 MobiDBLite consensus disorder prediction 372 388 - -
Bva08g01115 409 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Bva08g01115 409 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 306 369 IPR004827 GO:0003700|GO:0006355
Bva08g01115 409 MobiDBLite consensus disorder prediction 19 34 - -
Bva08g01115 409 MobiDBLite consensus disorder prediction 146 234 - -
Bva08g01115 409 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01115 Bva-Chr8 5687095 5693431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01115 1 407 bZIP Transcription Factor Family AT2G35530 62.169 1.24e-164 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva08g01115 MFMR_assoc 1.8e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01115 K09060 - vvi:100243644 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01115 08 5687095 5693431 Bva08g01115 08 5687095 5693431 ECH