Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01114 ATGGGTTATGAAAACGATCCgtATCGCGACGAGGATGGAGAGGCTTTGATGGATTACGATGACTTTCAATCCGATCGTGAGCAATCTCCCGAGCCTCATCAGCAAGGATTTGACGATTTGGAGGAAGACGTCGACGATTGGCGTGGGCGAGAGCGATCGCAGACTCCAGTCTATGATAATGATCCATCGATGTCAAAATCGAAGCCAAGGAAGAGGCTTATTAAGAAAAGCGACACTGTTAAGCAGTCTGTGGCCCCAGAGCTTGTTGatgaggaggaggaagaaaatggtCCGGCGAGTTTTGTGAGGGATGGCTCCAATGAGGCGGAAGctagaaagaggaaaaagatgaAGGATGGTGGCAGtgagaagaaggagaagaggcACAAGGGGGAGAAGAAGTTTGCAAGTAGTAGTAAGGGTGTCTCAAAATTTGGGCTTTCAAAGAAAGGGTTTGCTGGGAAGGATCATGATGGCGAAGTCAAGGAGATGTGGGATACAATTGCCGGCGGGGACTCAGAGGATGACCAAGAAGGTGTCAGGACAGTGGATGATGACAACTTTATAGATGACTCTGGAGTAGAACCTGCTTTATATGGTAGTGACAACGAACAACGATCTCCTCGTGAATATGCCCAGGCAGAGGAGGGCGAAGAGGATGACGAAATTAAGGATCTTTTCAAGATgggcaagaaaaaaaagaagaacgaGAGAAGTCCTGCAGAAATGGCTTTGCTAGTTGAGAATGTCATGGCTGAGCTTGAGGTTACTGCTGAGGAGGATGCTGAACTTAATAGACAGGGGAAGCCTGCcattaataaattgaagaaGTTGCCTCTTCTTACGGAGGTCCTCTCAAAgAAACAGCTTCAGGCAGAGTTTTTAGATCATGGAGTGTTAACACTATTGAAGAATTGGCTTGAACCCCTCCCAGATGGAAGCTTGCCAAATATAAACATCCGCACAgcaattttgaatattttaaatgatTTCCCTATAGACCTAGAGCAGTATGACAGAAGAGAACAGCTGAAGAAGAGTGGTCTTGGAAAGGTAATCatgtttttatcaaaatctgATGAAGAAATCGGTGTAAATAGAAAGTTGGCTAAGGATCTGGTTGATAAATGGAGCCGACCTATATTTAATAAGAGTACAAGGTTTGAAGACATGAGAAGCGCTGAGGATGAAAGGCTTCCTTATAGAAGACCATTAGTTAAAAAGCCAGCAAATAAAGCTGCGGAAATGGAATCTAGAGATGGCGATCTCGATTTAGAATTTTCACAGCGTAAGTCTGGGCAGTCCTCTTCTAGGCAACATGCATCAAGGCCAGAAGCGACACCGTTGGATTTTGTGGTGCGTCCCCCATCTAAAGTTGACCCAGAAGAAGTTAGAGCCCGTGCAAAACAGGCTGCACAAGATCAGCAGCGCATGAAGATGAATAAGAAGTTACAGCAGTTGAGGGCACCGAAAAAGAGGCAGCTCCAGGCCACGAAATTAAGTGTGGAAGGTCGGGGTATGCTAAAGTATTTATA 1535 0.4182 MGYENDPYRDEDGEALMDYDDFQSDREQSPEPHQQGFDDLEEDVDDWRGRERSQTPVYDNDPSMSKSKPRKRLIKKSDTVKQSVAPELVDEEEEENGPASFVRDGSNEAEARKRKKMKDGGSEKKEKRHKGEKKFASSSKGVSKFGLSKKGFAGKDHDGEVKEMWDTIAGGDSEDDQEGVRTVDDDNFIDDSGVEPALYGSDNEQRSPREYAQAEEGEEDDEIKDLFKMGKKKKKNERSPAEMALLVENVMAELEVTAEEDAELNRQGKPAINKLKKLPLLTEVLSKKQLQAEFLDHGVLTLLKNWLEPLPDGSLPNINIRTAILNILNDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEIGVNRKLAKDLVDKWSRPIFNKSTRFEDMRSAEDERLPYRRPLVKKPANKAAEMESRDGDLDLEFSQRKSGQSSSRQHASRPEATPLDFVVRPPSKVDPEEVRARAKQAAQDQQRMKMNKKLQQLRAPKKRQLQATKLSVEGRGMLKYL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01114 511 PANTHER PROTEIN IWS1 HOMOLOG 1 1 511 IPR044204 GO:0009742|GO:0032784
Bva08g01114 511 MobiDBLite consensus disorder prediction 1 222 - -
Bva08g01114 511 MobiDBLite consensus disorder prediction 428 443 - -
Bva08g01114 511 Coils Coil 247 267 - -
Bva08g01114 511 ProSiteProfiles TFIIS N-terminal domain profile. 301 384 IPR017923 -
Bva08g01114 511 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 239 387 IPR035441 -
Bva08g01114 511 MobiDBLite consensus disorder prediction 150 188 - -
Bva08g01114 511 MobiDBLite consensus disorder prediction 106 137 - -
Bva08g01114 511 MobiDBLite consensus disorder prediction 19 55 - -
Bva08g01114 511 MobiDBLite consensus disorder prediction 456 472 - -
Bva08g01114 511 Pfam TFIIS helical bundle-like domain 327 381 IPR017923 -
Bva08g01114 511 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 295 385 IPR035441 -
Bva08g01114 511 MobiDBLite consensus disorder prediction 402 496 - -
Bva08g01114 511 PANTHER PROTEIN IWS1 HOMOLOG 1 1 511 - -
Bva08g01114 511 MobiDBLite consensus disorder prediction 402 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01114 Bva-Chr8 5682181 5686343 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Bva08g01114 Med26 7.7e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01114 K17498 - gmx:100801805 771.926