Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01091 ATGGAGAGGAGCTATGACGGAGTTGTTGGTGGTGGTGGTCCTGGTGGAGTTGGAGGGTATCCATACGAGAATGGGGTGGTGATGACCAGAGACCCGAAGCCGAGGCTGAGGTGGACGGCTGATCTTCACGACCGGTTTGTTGACGCCGTCACTAAACTTGGTGGCCCCGACAAAGCGACTCCCAAGTCTGTATTGAGGATAATGGGCTTAAAAGGTTTGACATTGTATCATTTGAAGAGCCACTTACAGAAGTATAGACTTGGACAGCAGGCTCGAAAGCAAAACAGCGACGAACAACACAAAGAGAACAATACCAGAGGTTCATATGTAAACTTCAGCAGTCTTCCTAACACCAATTACAGAGTTGATAACGAAACAGGTGAAATGCCAATAGCAGAGGCACTGAGGCGACAGATTGAAGTTCAAAAGAGACTAGAAGAGCAGCTTGAGGTACAGAAGAAGCTGCAAATGAGAATAGAGGCTCAAGGAAAGTACTTGCACTCCATGTTAGATAAAGCACAAAAGAGCCTTACCCTTGATGTGAATGGAGCAAGTGGTTtagaagaagcaaaagcaCAATTGACAGACTTCAACTCTGGTCTGTCTAATTTCATGGACAATATGAATAAAAGTAGCAAAGATAACATGATGGACATGAATGATTTTTACAAGAAGAACCATGGTTCAGGTTTCCAAATTTACCAGGAAGGAGAGAGACAAGAAGATAAGGATCATAAGCCTAAGATTGCAGAAGGAGGGTCAATTCAGTTTGACTTAAACATGAATGGTAGCTATGATATTGTATCTGCAGGTGGAGCTGAAATGGAACCCAACATGCTCTCATATAGATTATA 854 0.4262 MERSYDGVVGGGGPGGVGGYPYENGVVMTRDPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRIMGLKGLTLYHLKSHLQKYRLGQQARKQNSDEQHKENNTRGSYVNFSSLPNTNYRVDNETGEMPIAEALRRQIEVQKRLEEQLEVQKKLQMRIEAQGKYLHSMLDKAQKSLTLDVNGASGLEEAKAQLTDFNSGLSNFMDNMNKSSKDNMMDMNDFYKKNHGSGFQIYQEGERQEDKDHKPKIAEGGSIQFDLNMNGSYDIVSAGGAEMEPNMLSYRL 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01091 284 Pfam MYB-CC type transfactor, LHEQLE motif 129 176 IPR025756 -
Bva08g01091 284 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 22 270 IPR044848 GO:0003700
Bva08g01091 284 Coils Coil 132 162 - -
Bva08g01091 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 90 IPR017930 -
Bva08g01091 284 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 33 88 IPR006447 GO:0003677
Bva08g01091 284 Pfam Myb-like DNA-binding domain 36 86 IPR001005 -
Bva08g01091 284 Gene3D - 32 90 - -
Bva08g01091 284 MobiDBLite consensus disorder prediction 89 117 - -
Bva08g01091 284 SUPERFAMILY Homeodomain-like 33 90 IPR009057 -
Bva08g01091 284 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 22 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01091 Bva-Chr8 5568246 5570963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01091 7 203 G2-like Transcription Factor Family AT3G24120 51.961 1.78e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva08g01091 Myb_DNA-binding 6.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01091 - - qsu:112001513 373.244