Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01077 ATGGCGGATTCGAGCTCTGCTTTGAGATTAGAACAGATTCCAGGAAAAGGTAGGGGTTGGATAGCAGCTCGGCCAATTAAAGCCGGCCAAATCGTTCTCAGAGAATCCCCTATCATTCTCTACTCTGCTATTCCCCTCATCTCTCACTCTGAACCCTCTTGTTCATCATTCTCCTACTGTGACTACTGCTTCAGAATCTTCGCACCGGCACTTCCAGAATCCATATTATCGTGCCCTTTATGTCCCCACGCTCGTTTCTGTAGCGAAAATTGCCTCTCCACTGCGCAGAAATCCTCACACTCCAGCTGGGTATGCCAAGCATTATCTCTTCTAAGAGAATCTAGCTCACTGCTTGAACAACCCCCTGAACGCCAAGTCCAAGCCCGTTTTGTTGTAGCAGCCTATAACCTTGCCATTCTTTCCCCTTCTGATCTCCAGAGCCTGCTTTCTCTTCTGGGTACTCCAGATTCTACCGTAGTTTTTGCTGCTCAGTTCCTTCACTCTCTCATTTCTTCTCTCTGCCCACCTCAGACTCAACTCTCTGTCGAACTCACAGCTCAATTGCTGGCCAAGGATAGGCTCAATTCCTTTTGCTTAATGGAACCTTATTCCCCAGATGGCCCCCAGAGATCCATCAAAGCATATGCAATTTACCCAGAAGCCTCTTTATTCAACCACGCTTGCCTTCCCAATGCTTGCAGATTTGGTTACTTGGAAGGCACTGCTCCTGGAGATGCACGCAACACTGACATCATCATCAGAACGATTCAGGATATTCCTGAGGGAACAGAAGTGTGCATAAGCTATTTCAGGATCAACAGAGATTATGATACTAGGAAGAAGATATTGATGCAGGATTACGGGTTTAGTTGTAAGTGCGAAAGGTGCAAAATTGAAGCACATTGGTCAGCAACAGCAAGCAATGGTGATTTCCCACATGcgtattttctttctaaatatGTGTGTGATAGAATCAACTGTTCTGGCACTCTGGCTCCTCTGCCTCCAACAGATCACACACCATCTAATGTTGTCGAGTGTAATTTCTGTGGAAATCTCAAAACTGATGTTGCCTCTGAACAAGCACTTGCTGCCAAGAACTA 1103 0.456 MADSSSALRLEQIPGKGRGWIAARPIKAGQIVLRESPIILYSAIPLISHSEPSCSSFSYCDYCFRIFAPALPESILSCPLCPHARFCSENCLSTAQKSSHSSWVCQALSLLRESSSLLEQPPERQVQARFVVAAYNLAILSPSDLQSLLSLLGTPDSTVVFAAQFLHSLISSLCPPQTQLSVELTAQLLAKDRLNSFCLMEPYSPDGPQRSIKAYAIYPEASLFNHACLPNACRFGYLEGTAPGDARNTDIIIRTIQDIPEGTEVCISYFRINRDYDTRKKILMQDYGFSCKCERCKIEAHWSATASNGDFPHAYFLSKYVCDRINCSGTLAPLPPTDHTPSNVVECNFCGNLKTDVASEQALAAKN 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01077 367 Gene3D - 119 196 - -
Bva08g01077 367 Pfam SET domain 17 269 IPR001214 GO:0005515
Bva08g01077 367 Gene3D SET domain 19 297 IPR046341 -
Bva08g01077 367 ProSiteProfiles SET domain profile. 6 270 IPR001214 GO:0005515
Bva08g01077 367 Gene3D - 59 114 - -
Bva08g01077 367 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 358 IPR044238 -
Bva08g01077 367 SUPERFAMILY SET domain 8 297 IPR046341 -
Bva08g01077 367 CDD SET_SMYD 194 296 - -
Bva08g01077 367 SMART set_7 6 276 IPR001214 GO:0005515
Bva08g01077 367 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 1 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01077 Bva-Chr8 5513144 5514615 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva08g01077 SET 7.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01077 - - gmx:100808530 453.751