Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01076 ATGTTTACATGCATAGCGTGTACGAAGACGGAAGATAGGGAGGAAGAAGGTGGAGGGCGTGAGAGTGGCACGCCGAGTACAAAAGAAGCCGTCAAAAGCCTGACGGCGCAGATAAAGGATATGGCTCTGAAGTTTTCTGGTGCTTACAAACAATGCAAACCCTGCACAGGGTCTAGTAGCTACAAGAGAGGACACAGACCATATCCAGACTTTGACACCATCTCGGAAGGGGTTCCATACCCATATATTGGGGGTGCAAGCTCAAGTTCAACCCCTGCATGGGACTTTACAAGCTCCAATTACCCTGGGGGAAGATCGGACCCAAGATTTGCTGGAGCATTTGGAGGTGACCGAACCCCTAGAGGGCGAGAATCAGCGTCAGCACTATCTTGTGATGTAGTTCTAGAAGACGAAGATGAGCCCAAAGAGTGGATGGCGCAAGTAGAACCAGGGGTCCATATCACTTTTGTGTCTCTTCCTAACGGGGGAAATGATCTTAAGAGAATTCGCTTCAGCCGAGATATGTTCAATAAGTGGCAAGCTCAAAGATGGTGGGGTGAGAATTATGACAGAATCATGGAGCTCTATAACGTTCAGAGATTCAATCGACAAGCTCTTAACACTCCTCCTAGGTCCGAGGATGAGCCTAGAGATTCTACTTACACAAAACTGGGCTCCGCAAGAGAGAGCCCCATGAACAAGGACTGGACACCAAGGCACCACTATAGACCCCCAGGAAACACAGGGTATTACCCATCCGATCCTTTAGATCAAGGAGGTGGCCACAATTTCCACGCAGGGTCAAGTGGTTATGGGATGGTTGGCCCCAAAGAGGCATCATCTATGGAAGCGTCACGAACAACGACCGATTCTCGAGATGAGCCTTCTATAAGCAACGCTAGTGAGATGGAAACAGAATGGGTAGAGCAAGATGAGCCTGGGGTATACATTACAATTAGACAGTTAGCTGACGGCACCAGGGAGCTCCGACGTGTCAGATTTAGCCGAGAAAGATTTGGGGAGGTAAATGCCAAGACCTGGTGGGAGGAGAACAGAGAGAGAATACAAGCTCAATATCTTTG 1082 0.4889 MFTCIACTKTEDREEEGGGRESGTPSTKEAVKSLTAQIKDMALKFSGAYKQCKPCTGSSSYKRGHRPYPDFDTISEGVPYPYIGGASSSSTPAWDFTSSNYPGGRSDPRFAGAFGGDRTPRGRESASALSCDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSRDMFNKWQAQRWWGENYDRIMELYNVQRFNRQALNTPPRSEDEPRDSTYTKLGSARESPMNKDWTPRHHYRPPGNTGYYPSDPLDQGGGHNFHAGSSGYGMVGPKEASSMEASRTTTDSRDEPSISNASEMETEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEVNAKTWWEENRERIQAQYL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01076 360 Pfam Transcription factor BRX N-terminal domain 22 55 IPR027988 -
Bva08g01076 360 ProSiteProfiles BRX domain profile. 305 360 IPR013591 -
Bva08g01076 360 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 360 - -
Bva08g01076 360 Pfam Transcription factor regulating root and shoot growth via Pin3 304 359 IPR013591 -
Bva08g01076 360 Pfam Transcription factor regulating root and shoot growth via Pin3 142 196 IPR013591 -
Bva08g01076 360 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 360 IPR044532 -
Bva08g01076 360 MobiDBLite consensus disorder prediction 9 30 - -
Bva08g01076 360 MobiDBLite consensus disorder prediction 206 307 - -
Bva08g01076 360 MobiDBLite consensus disorder prediction 281 304 - -
Bva08g01076 360 ProSiteProfiles BRX domain profile. 142 197 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01076 Bva-Chr8 5499740 5506312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01076 1 360 Major Intrinsic Protein MIP AT1G31880 69.399 1.62e-175 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01076 - - gmx:100785003 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01076 08 5499740 5506312 Bva08g01076 08 5499740 5506312 ECH