Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01074 ATGGAGAgGTACAAGTTAATCAAGGAAGTTGGTGATGGAACATTTGGGAGTGTCTGGAGAGCTATTAATAAGCACACTGGTGAAGTTGTTGcaatcaagaaaatgaagaagaaatattacTCTTGGGAGGAGTGTGTGAACCTGAGAGAAGTCAAGTcgttaagaaaaatgaaccaCCCGAATATTGTCAAATTGAAGGAAGTTATTCGAGAAAGTGACATTTTGTACTTTGTTTTTGAGTACATGGAATGCAACCTATACCAGCTCATGAAAGACAGGGAAAAGCTGTTTCCTGAGGGTCAAGTTAGAAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTACATGCATCAACGTGGGTACTTTCATCGTGACCTGAAGCCAGAAAACCTCCTTGTCACAAAGGATATCGTTAAAATCGCTGATTTTGGTCTTGCTCGAGAGATCAGTTCACAACCACCCTACACTGAGTATGTCTCCACGCGGTGGTATCGTGCACCTGAGGTGTTGCTTCAGTCTTATTTATATGGTTCCAAAGTTGACATGTGGGCAATGGGTGCTATCATGGCTGAGTTGTTCAGTCTTCGTCCTCTTTTCCCAGGTGCAAGTGAAGCAGATGAGATTTACAAAATATGCAGCGTGATAGGCAGTCCAACTATGGAATCATGGCCGGATGGACTCAAACTCGCAAGGGATATCAACTATCAGTTTCCACAGCTTGCTGGTGTACATCTTTCTGTGTTGATCCCATCTGCTAGTGATGACGCAATCAGCCTTATTAcaTCGCTTTGCTCATGGGATCCTTGCAAGAGGCCAACAGCTGCTGAGGCCCTTCAACATCCTTTCTTTCAGAGTTGCTTCTATATTCCTCCTTCCCTTCGCACCAGAGCGGTAGGCAGAACTCCACCATCTGGAACAAGGGGAGCACTGGATCGGCAAGGGGTTAAGAGATATTCCGGTGCTTTGTCTAATTCAAAGCCCATCACTAATTTTCCTTCCCCAAAAGTACATCATTCTGTAGCTACAGGTGACCCGAATAGTATTTGTGTGCAACGCAAGCTGGATATGGCTAATGAGGATGGAATTAAGACTGAGAAGTCCTTGAAGACTAGACAACCAAAATATCGATCGCCAGTAAAGGATAGCCCACCTTCTTTAAACAAGGGAAAAATTGCACGTGGGGTTTCAGAAACAGCTGAGAAGTTGTCTAATATGACTGTTGATTCTCGGAGACAATCTATGGGTCAACAACCGCGTGCTCCTCCAATGAAAGCTGGAGTCAATTGGATTTCTGAATCTGGAAACTTCCTGCTTAAGCCGGCAAAAGAGATTTCAACTGGAACAACTTACTCGAGGAAAGTTGCTGGATG 1370 0.4277 MERYKLIKEVGDGTFGSVWRAINKHTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDREKLFPEGQVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDIVKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYLYGSKVDMWAMGAIMAELFSLRPLFPGASEADEIYKICSVIGSPTMESWPDGLKLARDINYQFPQLAGVHLSVLIPSASDDAISLITSLCSWDPCKRPTAAEALQHPFFQSCFYIPPSLRTRAVGRTPPSGTRGALDRQGVKRYSGALSNSKPITNFPSPKVHHSVATGDPNSICVQRKLDMANEDGIKTEKSLKTRQPKYRSPVKDSPPSLNKGKIARGVSETAEKLSNMTVDSRRQSMGQQPRAPPMKAGVNWISESGNFLLKPAKEISTGTTYSRKVAG 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01074 456 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Bva08g01074 456 CDD STKc_MAK_like 4 283 - -
Bva08g01074 456 Gene3D Transferase(Phosphotransferase) domain 1 84 288 - -
Bva08g01074 456 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Bva08g01074 456 MobiDBLite consensus disorder prediction 360 376 - -
Bva08g01074 456 MobiDBLite consensus disorder prediction 360 391 - -
Bva08g01074 456 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 419 - -
Bva08g01074 456 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01074 456 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Bva08g01074 456 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 1 419 - -
Bva08g01074 456 MobiDBLite consensus disorder prediction 321 344 - -
Bva08g01074 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Bva08g01074 456 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01074 456 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01074 456 MobiDBLite consensus disorder prediction 321 336 - -
Bva08g01074 456 MobiDBLite consensus disorder prediction 405 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01074 Bva-Chr8 5492736 5499677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01074 1 290 Core Cell Cycle Gene Families AT3G48750 36.700 4.30e-66 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Bva08g01074 Pkinase 2.2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01074 K08829 - gmx:100810150 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01074 08 5492736 5499677 Bva08g01074 08 5492736 5499677 ECH