Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01073 ATGGAGAAAACAAGGTCAGATCAGGTTGTTCTCTTCGTTGACCAATTTAACCATAAAGCTCCATCCATGGACACTGAAAGCGACCAAACTGCTGCTGCTTATGAGAAGCCTAAACACCCTTTAAGAGTCAAAACCCTTAATCGTCTCAGCTTCTCCAAACCTAAATCCCGCTTTCAAGAATATCACTATGCACCCACCAGCAAACTCACAATCTCTGAAGAATCTGACATCCAACCTTCCATTAAGTTTTCTTCCtcagatgaagatgatgatgacgaTGACGAGAAATGGAATGAAGAAGAGATTGAGGAAGATGGTGGAGAGTACGGACACAAGTTAcaccaaaagaagaagaagcgtAAAATTCCATTGAGACATGTGGTGGAGTGGGCATTGTTTCTCATCATATTGACTTGCTTGGTTTGCTCTTTGACTATAACTTCCATCAGCAACAAGCTTTTGTGGGGCTTGGAGGTTTGGAAATGGTGTCTGATGATAATGGTCACCTTCAGTGGCCGTTTGGTTTCTGGTTGGGTAATGGCTGTCATTGTCTTCTTCATTGAGCTAAATTTCATGCTCAGAGAGAAGGTTTTGTACTTCATCTATGGCGTTAGAAGGAGCTTCAGAAACTGTCTGTGGTTAGCCCTTGTTTTGCTTGCATATTGGACTCTAATATCAGACGGTGTTcataagaaagaccacaagATTCTCGACAAGGGTTTTCAAGCATTAGTGGCAGTCTTGATTGGTGCTATAATCTGGCTTATGAAGATTGTGCTCGTGAAATTGCTAGCTTCTTCGTTCCATGTTGCCACCTACTTTGACAGAATGAAAGAAAGCGTTTTCCACCATTATATATTGGATACCTTGTCAGGTCCTCCAATGGAGGAAACTGAAGAGATGGAACACCGTAATCTCTCAGCGTCTAAGTCCCTCCCTGCAAGATGGAAAGAGAAGCGATACGGGTCACAGAGGATTGACATGGAGAAGCTCAGAAAGCTCAGTATGGAGAGCAGAGCATCGGCGTGGAGCGTGAAAAGGCTTGTTAACTATGTAAGGTCGTCTGGTTTGTCAACCATTTCAAGGACTGTGGATGATTTTGGTACGGCTGAGTCTGAGATCAACAGCGAGTGGGAAGCTAGAAACTGTGCCCAAAGGATATTCAAGAACGTTGCCAAACCGGGTGCCAAgtATATTGAAGAGGAGGATCTCATGAGATTTTTGAAGAGGGTCGAGATCCATACCATATTTCCATTCTTTGAAGGTGCCCTTGAAACTGGAAAGATTAGCAGATCTTCACTGAGGAATTGGGTGGTTCGAGCTTACTTTGAACGAAAAGCTCTTGCACAATCCTTGAATGACACCAAAACGGCAGTGCAACAGCTTCACAGACTAGCAAGCGGAGTTGTGGTTGTGATAATAGTCATCGTGTTCCTGTTAGTGATGGAATGGGCTACCCTCAGTGTAATACTTGTTTTCATGACACAAATAGTTTTAGTTGGGGTTGCCTTCCAAGGTACTTGCAGGACTGTCTTGGAGGCCATCATCTTTGTCTTCGTCATGCACCCTTTTGATATTGGAGACCGCTGTGTCATTGATGGTGTCCAGATGATTGTGGAGGAGATGAATATCCTGACAACCGTATTTCTTCGTTATGACAATGAGAAAATATACTACCCCAACTCAGTTTTGCTCAACAAGCCTATAAGTAATTTCTACAGGAGTCCTGAGATGTGCGATGTTATTGATTTCACCATTGATGTTTCAACTCCCATGGAGATTATCATTGCTCTCAAGAAATCAATCCAAACGTACATTGAGAGCAAGCCAAAGTATTGGAACCCAAAGCACAGCGTGATagtgaaagaaatagagaacgTGGATAAGCTGAAGCTGAGCTTATGTGTTCAACACACCATCAACCATCAAAACTACGGCGAGCGAAACAATCGTATGACTGAGCTTCTCTTGGAACTGAAAAAGATCTTCGAGACCCATGGTGTTAAGTACCATGTTCTGCCTCAGGAGCTGCACATCACCAAGATGGTGAACATTGAAAATGGGAGAGTCCTGTTTTA 2078 0.4158 MEKTRSDQVVLFVDQFNHKAPSMDTESDQTAAAYEKPKHPLRVKTLNRLSFSKPKSRFQEYHYAPTSKLTISEESDIQPSIKFSSSDEDDDDDDEKWNEEEIEEDGGEYGHKLHQKKKKRKIPLRHVVEWALFLIILTCLVCSLTITSISNKLLWGLEVWKWCLMIMVTFSGRLVSGWVMAVIVFFIELNFMLREKVLYFIYGVRRSFRNCLWLALVLLAYWTLISDGVHKKDHKILDKGFQALVAVLIGAIIWLMKIVLVKLLASSFHVATYFDRMKESVFHHYILDTLSGPPMEETEEMEHRNLSASKSLPARWKEKRYGSQRIDMEKLRKLSMESRASAWSVKRLVNYVRSSGLSTISRTVDDFGTAESEINSEWEARNCAQRIFKNVAKPGAKYIEEEDLMRFLKRVEIHTIFPFFEGALETGKISRSSLRNWVVRAYFERKALAQSLNDTKTAVQQLHRLASGVVVVIIVIVFLLVMEWATLSVILVFMTQIVLVGVAFQGTCRTVLEAIIFVFVMHPFDIGDRCVIDGVQMIVEEMNILTTVFLRYDNEKIYYPNSVLLNKPISNFYRSPEMCDVIDFTIDVSTPMEIIIALKKSIQTYIESKPKYWNPKHSVIVKEIENVDKLKLSLCVQHTINHQNYGERNNRMTELLLELKKIFETHGVKYHVLPQELHITKMVNIENGRVLF 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01073 692 Pfam Mechanosensitive ion channel 469 669 IPR006685 GO:0016020|GO:0055085
Bva08g01073 692 PIRSF Memb_At2g17000 5 690 IPR016688 -
Bva08g01073 692 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 3 691 - -
Bva08g01073 692 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 3 691 IPR016688 -
Bva08g01073 692 MobiDBLite consensus disorder prediction 86 104 - -
Bva08g01073 692 Gene3D - 523 572 IPR023408 -
Bva08g01073 692 MobiDBLite consensus disorder prediction 80 110 - -
Bva08g01073 692 SUPERFAMILY Sm-like ribonucleoproteins 514 572 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01073 Bva-Chr8 5486974 5491464 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01073 19 681 Mechanosensitive Ion Channel Family AT5G12080 43.415 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01073 K22048 - gmx:100813521 1005.36