Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01065 ATGGAGTCCGGTGAGCAGGAGGACACGTCGGCTCGACAGGTCTGTGCAAATGGAACTTGCATGAAAACATCAGAAGTCGAAGCAAGGCTGGATGAAGGAAATATTCTAGAGGCTGAAGCTTCTTTGCGAGAGGGGTTATCACTCAACTTTGAGGAAGCACGAGCTCTTCTTGGTAAGTTGGAGTATCAGAGAGGTAATGTAGAAGGTGCTCTTCGTGTGTTTGAGGGGATCGACCTCCAAGCTGCCATACAGCGGTTACAAGCTTCCCTTTCAGAAAAACCATTCAACACCAAGAAAGGTCGCACTCGAAGCGAATCACCTTCCTCAGTCTCACAGCATGCTGCTAGTTTGGTCCTTGAAGCCATCTACTTAAAAGCCAAGTCTCTACAGAAGCTGAGGAAGTTAATAGAAGCTGCCCATGAATGCCAAAGTGTGCTCGATGCTGTTGAGAAGATATTTTATCGGGGTATCCCCGATGTTCAAGTGGATAATAAGTTACAGGAGATAGTGAGCCATGCTGTAGAGCTACTTCCAGAGCTTTGGAAGCAGGCCGGTAGCTATCATGAGGCTATGACTGCTTATAGGCGTGCCCTTCTTAGTCAATGGAACCTTGATAATGATTGCTGTGCTAGAATTCAGAAAGGGTTTGTTGTGTTTTTGCTTTACAGTGGGGTGGAGGCTAGCGCTCCCAGTTTAGCTGTTCAGATTGAGGGATCTTATGTACCTAAAAATAATCTGGAAGAGGCAATTCTTCTTCTGATGATTCTTTTGAGGAAGTTTTGCCTTGGTAAGACCAAATGGGATCCTTCAGTTATGGAACACCTAAATTTTGCACTCTCTATCTGTAGCCAAACTTCTGTTATAGCAAAGCAACTGGAAGAGTTATTGCCTGGGGTATATCATCGTATTGACCGTTGGAATTCTTTAGCTTTATGTCATAGTGCAGCTGGACAAAACAAGAGTGCTTTGAATCTACTGAGGAAGTCTTTGCACAAACATGAACGACCTGATGACCTCATGTCATTATTATTGGCTGCCAGGATCTGCAGTGAGGATCCGTATCTTGCTGCTGAGGGAGTGGGGTATGCAGAGAGGGCCATTAGTAATTGTCAGGGCCTGCATGAGCATTTGAAAGGTGTGGGTCTACGGATGTTGGGACTTTGTCTAGAAAAGCAAGCCAAGGTTGCTTCCTCTGACTTTGTAAGATCTAACCTTCAGTCCAAAGCTCTGAAATCACTGGAGGAAGCTATTCGATTGGAACAAAATAATGCTGATCTGATTTTTGAGTTGGCTTTTCAATATGCAGAGCACCGGAATTTGACTGCTGCTTTGCGGTATGCAAAGCACTTCTTCAATAAAACAGGTAGCTCTATATTGAAAAGTTGGAGGCTGCTTGCTCTGATTTTGTCTGCTCAACAAAGATTTTCAGAGGCTGAAGTGGTGACAGATGCTGCATTAGATGAGACTGCAAAATGGGAGCAAGGGCCACTGCTTAGGTTGAAAGCAAAACTGAGGATTTCCCAGTCACGGCCAATGGATGCTATTGAAACCTTCCGGTACCTCTTAGCATTGGTTCAAGCCCAGAGGAAATCCTTTGGGCCTCTCAGAAATACATCACAGGTTGATGATGATAAAGTAAGTGAATTTGATGTTTGGCATGGTCTGGCAAATTTATATGCAAGCCTCTCTCATTGGAAGGATGCTGAAATATGCCTGCAAAAGGCCAGAGAGTTCAAGCAGTACCCGGTGGCAGCACTCCACACAGAAGGTGTTATGGCTGAAAGACAGGGACAAAAGCAGGAAGCTGTTGCTGCTTATATGAATGCTGCACTACTTGAACCAAGCTATGTTCCAAACAAGAATTCGTTAGGAGCTTCGTTGTTAAAAATGGGTTCACAGGCTATGCCTGTGGCAAGAAGTTTACTATGTGATGCGCTTAGGATAGATCCCACCAACCGCATGGCATGGTTTTATTTGGGAATGGTTCACAAGGATGATGGCCGAATAGGCGATGCTGCTGATTGCTTCCAAGCAGCTTCCATGCTTGAAGAATCTGATCCCATTGAAAGTTTCAGCACTATTCTTTG 2087 0.4475 MESGEQEDTSARQVCANGTCMKTSEVEARLDEGNILEAEASLREGLSLNFEEARALLGKLEYQRGNVEGALRVFEGIDLQAAIQRLQASLSEKPFNTKKGRTRSESPSSVSQHAASLVLEAIYLKAKSLQKLRKLIEAAHECQSVLDAVEKIFYRGIPDVQVDNKLQEIVSHAVELLPELWKQAGSYHEAMTAYRRALLSQWNLDNDCCARIQKGFVVFLLYSGVEASAPSLAVQIEGSYVPKNNLEEAILLLMILLRKFCLGKTKWDPSVMEHLNFALSICSQTSVIAKQLEELLPGVYHRIDRWNSLALCHSAAGQNKSALNLLRKSLHKHERPDDLMSLLLAARICSEDPYLAAEGVGYAERAISNCQGLHEHLKGVGLRMLGLCLEKQAKVASSDFVRSNLQSKALKSLEEAIRLEQNNADLIFELAFQYAEHRNLTAALRYAKHFFNKTGSSILKSWRLLALILSAQQRFSEAEVVTDAALDETAKWEQGPLLRLKAKLRISQSRPMDAIETFRYLLALVQAQRKSFGPLRNTSQVDDDKVSEFDVWHGLANLYASLSHWKDAEICLQKAREFKQYPVAALHTEGVMAERQGQKQEAVAAYMNAALLEPSYVPNKNSLGASLLKMGSQAMPVARSLLCDALRIDPTNRMAWFYLGMVHKDDGRIGDAADCFQAASMLEESDPIESFSTIL 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01065 695 SUPERFAMILY TPR-like 304 479 IPR011990 GO:0005515
Bva08g01065 695 Gene3D Tetratricopeptide repeat domain 23 201 IPR011990 GO:0005515
Bva08g01065 695 Gene3D Tetratricopeptide repeat domain 286 453 IPR011990 GO:0005515
Bva08g01065 695 PANTHER CALMODULIN-BINDING PROTEIN 1 694 - -
Bva08g01065 695 SUPERFAMILY TPR-like 498 683 IPR011990 GO:0005515
Bva08g01065 695 Gene3D Tetratricopeptide repeat domain 455 690 IPR011990 GO:0005515
Bva08g01065 695 PANTHER PROTEIN NPG1 1 694 IPR043376 -
Bva08g01065 695 SMART tpr_5 653 686 IPR019734 GO:0005515
Bva08g01065 695 SMART tpr_5 583 616 IPR019734 GO:0005515
Bva08g01065 695 SMART tpr_5 549 582 IPR019734 GO:0005515
Bva08g01065 695 SMART tpr_5 303 336 IPR019734 GO:0005515
Bva08g01065 695 SMART tpr_5 119 152 IPR019734 GO:0005515
Bva08g01065 695 SMART tpr_5 459 492 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01065 Bva-Chr8 5442026 5446085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01065 7 695 Calmodulin-binding Proteins AT2G43040 74.747 0.0 1021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01065 K21843 - mnt:21395915 1061.98