Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01064 ATGTGCATTGGAGATATATATTCTGGGGATAATTCTGCTGAGAAGAATGAGCTTCGTGATGAGAAGGATAACCTAAAGATGGATAAAGAATACCTGGAGCAGCAGGTCAAAACAATGAATGCACAGCTCTACTTCCTCTCTCATCTCTCCGCTGCATTAGCTGCCAAAGGGCAAACTGCCAGCCACAAGCTGATACATTGTATTGGTTACGTTGGAATTGCGATGCGGCAATTCATGCTACCTGCTGCTAGCCACAAGCTgctacatttttcttctttctggcTAACTTTGTTAATGGATACTTG 305 0.4033 MCIGDIYSGDNSAEKNELRDEKDNLKMDKEYLEQQVKTMNAQLYFLSHLSAALAAKGQTASHKLIHCIGYVGIAMRQFMLPAASHKLLHFSSFWLTLLMDT 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01064 101 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 13 83 - -
Bva08g01064 101 PANTHER BHLH TRANSCRIPTION FACTOR 13 83 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Bva08g01064 101 Coils Coil 15 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01064 Bva-Chr8 5441308 5442438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01064 14 83 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 50.667 2.52e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01064 - - mtr:MTR_2g089000 83.9593