Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01063 ATGGGTAAGCCACAGAATTCAAGGGGAAGTGACGAACTTCACACAGCGGCGAGGTCCGGTGATCTGAATGCTGTTCAGTCAATTTTGAGTTCAAATCCTTTGGCTGTTAATTCCAGAGATAAGCACTCAAGAACACCGCTACATTTAGCAGCATGGTCCGGGCAAGAAGAGGTTGTCAGTTATCTTTGCAAGCACAAGGCTGATGTTGGTGCTGCTGCCATGGATGACATGGGAGCAATACACTTTGCTGCACAAAAGGGTCATTTACAAGTTGTTCGGGCCCTTGTTTCAGGTGGGGCTTCTGTGAAAGCTTCCACTCGTAAAGGCATGACATCATTGCACTATGCTGCTCAAGGGTCAAATCTAGAACTCGTCAGGTACTTGGTAAAGAAAGGGGCAAGTCTCAGTGCGAAGACAAAGGCTGGAAAGACTGCTTTGGATCTTGCCACTAATGAAGAAATCCGCTCCTTTCTAGAGGAGTTTGAAAAATCAACTAAGAATGGAGAATCAAGCAGCAAAAAGAAAGCTGAAGAATCTGATATGAAAACATCTACTTCAGGAGtggaagaaaatttggaaGTAGAACCTCCTGCATCTGCCattgatgaagaaaatattgacagagagaagaggaagagtAATGAAGATGACGTAAAAGAAGCTACATCACTACCGAAGAAGCCAAGGGTTAAGCTAAGCCATCTCCAAAGTTCAGATGATgcccaagaagaagaagacgagTA 743 0.4024 MGKPQNSRGSDELHTAARSGDLNAVQSILSSNPLAVNSRDKHSRTPLHLAAWSGQEEVVSYLCKHKADVGAAAMDDMGAIHFAAQKGHLQVVRALVSGGASVKASTRKGMTSLHYAAQGSNLELVRYLVKKGASLSAKTKAGKTALDLATNEEIRSFLEEFEKSTKNGESSSKKKAEESDMKTSTSGVEENLEVEPPASAIDEENIDREKRKSNEDDVKEATSLPKKPRVKLSHLQSSDDAQEEEDE 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01063 247 ProSiteProfiles Ankyrin repeat profile. 75 107 IPR002110 GO:0005515
Bva08g01063 247 SUPERFAMILY Ankyrin repeat 6 156 IPR036770 -
Bva08g01063 247 MobiDBLite consensus disorder prediction 201 239 - -
Bva08g01063 247 ProSiteProfiles Ankyrin repeat profile. 42 74 IPR002110 GO:0005515
Bva08g01063 247 MobiDBLite consensus disorder prediction 161 247 - -
Bva08g01063 247 PRINTS Ankyrin repeat signature 43 58 IPR002110 GO:0005515
Bva08g01063 247 PRINTS Ankyrin repeat signature 124 138 IPR002110 GO:0005515
Bva08g01063 247 Gene3D - 3 74 IPR036770 -
Bva08g01063 247 ProSiteProfiles Ankyrin repeat profile. 108 140 IPR002110 GO:0005515
Bva08g01063 247 ProSiteProfiles Ankyrin repeat region circular profile. 108 140 - -
Bva08g01063 247 Pfam Ankyrin repeats (3 copies) 80 158 IPR002110 GO:0005515
Bva08g01063 247 Pfam Ankyrin repeats (3 copies) 11 70 IPR002110 GO:0005515
Bva08g01063 247 SMART ANK_2a 8 38 IPR002110 GO:0005515
Bva08g01063 247 SMART ANK_2a 75 104 IPR002110 GO:0005515
Bva08g01063 247 SMART ANK_2a 108 137 IPR002110 GO:0005515
Bva08g01063 247 SMART ANK_2a 42 71 IPR002110 GO:0005515
Bva08g01063 247 ProSiteProfiles Ankyrin repeat region circular profile. 75 104 - -
Bva08g01063 247 MobiDBLite consensus disorder prediction 161 184 - -
Bva08g01063 247 ProSiteProfiles Ankyrin repeat region circular profile. 42 69 - -
Bva08g01063 247 Gene3D - 75 179 IPR036770 -
Bva08g01063 247 PANTHER - 3 246 - -
Bva08g01063 247 PANTHER ANKYRIN REPEAT PROTEIN 3 246 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01063 6 172 Ion Channels AT2G26650 32.955 1.30e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01063 - - gmx:100815134 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01063 08 5437855 5439810 Bva08g01063 08 5437855 5439810 ECH