Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01052 atggaAGGGAAGACAGATGACAAGTCGATGGGTAGAGCTATTGTTTTGCACCTTGTAGCCGGTAATGTTGAGCCTCACAACGCAGCAGTAGCACCCAGAATCGCACAATCCCATGTGGACGGTAAACCCTCGTATGAATTGGGGGTTTTAAGGAAGGAAGAGGGCGATATAAAGAGGCGAAGGAGGGAAGCCAGAGGTCTGAACCTCAGATCGGAACTGGTCTGTCTGCACAACATGGGATATGACTCGGATAGCCCCTCGCAGGATGGGAGGGAAGAGGatgatgatgaagaataCGAGGAGGGTGGCAAGGGTAATCGTTTGCTAGGATTTATGTTTGGAAATGTTGATAATTCTGGCGATCTTGATGTTGATTACCTTGATGAGgatGCAAAGGAGCACCTTTCTGCACTGGCTGACAAGCTGGGCCCATCACTGACAGATATAGATTTGTCAGGAAAATCACCCCAAACACCAGCTGATGTTGTGGAACAAGATTATGGTGAAAAAGCTGAAGATGCAGTTGACTATGAAGATATTGATGAGGAGTATGATGGTCCGGAGTCTGAAGCTGCAAATGAAGAGGACCATTTATTGCCAAAAAAGGAGTTTTTTTCTGCTGGAGCCTCTCTTGAAGTTTTGGAGTCCAGAGCTTCTGTCTTTGATGATGAAAACTATGATGAGGAATCTGAAAAGGAACAAGACTTAGTAAATGACAATATTGAAGTTGCTGACATCTCTTTATCTGGGGAGCAGGTAGAGAGTCTTGCAGTTGCATCTAAAGGAGAGACAGCTCTTGAACATGATTTACAAGTTGACTCACTGCAGAATGAAGTGTTGGACATTGATGAACAAAATCTTCAGGTGGAAGGGCCTGAAGTCCAAAAAGGGTCTACACCTCTGCCTGTTTTGTGTGTGGAAGATGGGATGGTGATTTTAcgattttctgaaatttttggtATTCAAAAGCCTCCTAGGaagggagagaagaaagagcATCGACATTCTGTATCTAGAGATAGATACAAGTCTTTTGATCTATCAAATATGGTAGAAGATGATGAGGAGGCATTCCTCAAGGGGTCTTCTCATAATCTCTCACTTATTAAAAAGGCTTCTGTAGTCCAAAATGGTACTtcagaaaataatgatgtTGATTCTGAGTTTCCAAAATTTGGATATATTCATGGAGCTTCCTCAATGGCTGTGAAAGAAGGTAGACGACAAAAAGACGCTTGTCTCAGTGCAGAACCAATGAAAGTGGATTTCACAGGAGATCTTTCTTGGAAAGAGCAGTCTCTTTCTTCTGCTAATTTCTATCCTCTTGATCAGCTGGACTGGGAAGATGAAATCCTTTGGGGCAACTCTCCTGCTTCAAGGGACAATTATATTGAGAGCTGTGAAATTTCTGGATTTGACTCGGGATCTTCTGAGTGTGGTGAGATAGAAATTGGAAGTAGGATACAAAATCTTCAATTGGAACCACAGAAGGAACTAGAGGAGAAAAATCATAGTATAGTCATGTGTAGCTCTCCAGTCTCATTGGAGTCCTTTGGCTCAGGGGATTCTTTGGGTGCTAAAACCAATGAATTGTCAAAGAGTGTATTTCATCCTCAACTTTTGAGATTAGAATTTAGATCTGAAGGAAATATTTCTAGCCCTGTTGATGGTAGAAGGGAGAATGTATTGGAGGAGCATAATCAAAGTGATCTAATGAAACGTTTTACCAAAGTTTCATCACAAAACAGGGACATGATGGAAGACTCTTGGTTAGACAAGATAATATGGGATCCTGATAGGCCTATTGTGAAACCAAAGCTCATCTTTGATCTTCAGGATGATCAAATGCATTTTGAAGTTTTAGATAATAAGGATGGTAGACATTTTTGCCTACATGCAGGGGCTATGATCTTAACTCGTTCTGTAAAATCAAGCAATGGGGACTCTTCTGAGCTATCAGGACATGGAGGTCAACATGGATGGCGATATGTTGCCAATGACAAACACTATTCAAACAGAAAAACATCCCAGCAATTGAAATCTAATTCCAAAAAACGGTCAGCTCATGGTGTCAAAGTTTTTCACTCACAACCGGCGCTGAAGCTTCAGACAATGAAGTTGAAGTTGAGCAATAAAGATATTGCAAATTTTCACCGACCAAAAGCTTTGTGGTATCCCCATGATAATGAGATGGCTGTCAAAGAACAAGGGAAATTGCCTACACAAGGACCTATGAAAATCATAATGAAGAGCCTGGGTGGCAAGGGGAGTAAATTGCATGTTGACGCTGAAGAAACTCTCTCGTCTGTCAAAGCAAAAGCTTCTAAAAAGCTAGATTTCAAGCTGCCAGAAgcagttaaaatattttatcttgggAAGGAGCTTGAAGATCATAAATCACTTGCTGCACAAAATGTTCAACCAAACTCCTTGTTACATCTTGTTCGAACAAAGATACATTTATGGCCAAGGGCACAAAGGGTTCCTGGAGAGAACAAGTCCTTGCGTCCTCCTGGGGCATTCAAGAAAAAGTCTGATCTTTCTGTAAAGGATGGACATGTGTTTCTAATGGAGTATTGTGAGGAACGGCCTTTACTTTTGAGCAATGTTGGAATGGGTGCTAGGCTTTGCACATACTATCAAAAATCTTCTCCAGATGATCAAACAGGCTCCTTTTTGCGTAACACGTGTGATAATTTGGGCCATGTTATTTCACTGGATCCTTCTGataaatctcctttccttggagATTTTAAATCTGGTTGCAGTCAGTCATCACTGGAAACCAACATGTATAGAGCACCCACATTTCCTCATAAAGTGCCATTAACAGATTACCTGCTGGTTCGTTCATCAAAAGGGAAGCTATCTTTAAGGcgtattgataaaattaatgttgtcGGACAGCAGGAGCCTCTGATGGAGGTATTATCACCTGGAAGTAAGAATCTTCAGACATACATGATGAACAGGCAACTTGTGCACATGTGCCGTGAATTTCAGGCAGTTGAGAAGCGTCACTTGCCTCCGTATATTCGTGTAGATGAGTTGCTTTCGCAGTTTCCATACCTATCAGAAGCCTCTTTCCGTAAGAGAATTAAGGAATTTGCCAATTTGCAGAAGGGAACAAATGGACAGTCAATTTTGGTTAAAAAGCGAAACTTTCGCATGTGGTCAGAGGAAGAATTGAGAAAGATGGTGACGCCAGAGCTTGTATGTGCTTATGAAAGCATGCAAGCTGGTCTTTACCGTCTAAAACATTTAGGAATAACTGAAACACATCCTACAAATATATTGTCTGCGATGAGTCGGCTTCCTGACGATCCAATACAACTGGCTGCGGCATCACACATTGAGAGGGAACTGCAGATTACGCCATGGAACTTGAGTAGCAATTTTGTTGCTTGTACAAGCCAGGGGAAGGAAAATATTGAGCGAATGGAAATTACTGGTGTTGGTGATCCATCTGGTCGTGGCATGGGCTTTAGCTATGCTAGAGCTCCTCCAAAGGCACCAGTGTCAAGTGCAAtggtaaagaagaaaacagctGCAGGGCGCGGAGGTTCGACTGTTACTGGCACAGATGCTGATCTTCGGAGATTGAGCATGGAGGCTGCACGAGAGGTCCTTCTTAAGTTCAACGTTCCTGAAGAAGTCATTGCTAAACAAACCAGGTGGCATCGCATTGCTATGATACGCAAACTATCAAGTGAGCAAGCTGCAGCTGGAGTTAAGGTTGACCCAACAACTATTAGTAAATATGCTCGTGGTCAACGAATGTCCTTTCTTCAGCTGCAGCAGCAGACAAGGGAGAAGTGCCAGGAAATATGGGATAGACAAGTTCAGTGTTTGTCAGCTGTTAATGGTGATGAAAATGAGAGTGACTCTGAAGAAAATAGTGATTTAGATTCTTTTGCTGGAGATCTAGAAAATTTACTTGATGCTGAGGAGTGTGAAGAGGGAGAAGAGGGTACCAATGACTCTAAGCGTGACAAGGCTGATGGTGTAAAGGGTGGTCTCAAAATGAGAAGACACCCAACTATGGTCCAGGCAGAGGAGGAAATTGAAGATGAAGCAGCTGAGGCAGCTGAATTATGCAGGTTACTCATGGATgATGATGAAGCTgataggaagaaaaagaagaagactaAAATCATAGGAGAAGAATCAGCATTGGTACCTAAGCTGCAATCACGATATGGCTTTGACAACAAAGATCaagttaaacaaataaataacactGTTCAGGTATCCGGAGCCAATATTTTGAGAGAGGATGGTGTTAGAAATGTCAGGGAGGAGGAAAATACTCCTGTTAAAAAAAGCAAATCAGCAAAGGTGAAAACAATGAAGAAGAATGGTGATATACCTATTAATCTACTGaataaaaaactcaaaatagCTGGAGATGGAATTAAGGTATTTAAGGAGAAGAAATCAGCAAGGGAAAGTTTTGTCTGTGGAGCCTGTGGTCAGCTTGGGCACATGAGAACAAACAAGAATTGTCCAAAATATGGTGAAGATCTAGAATCACAACTTGAATCTACTGACATGGAAAAAACATCTGGAAAACCGAGCTCTTTAGATCCCTCTAGTCAGCCCCAGCAGAAAACCCTCGCCAAGAAGCTATCAAAAAGTGCAACTAAAAGTGCTCCAGTTGAAGCTCAGGAAGGAGAAAAATCTAGCTTGAAGACAAAAGTCCTTCCAGTGAAGTTCAAATGCAGCTCCACTGAGAAACCTGATAAACTTGCTATCGAAGCCCTACAGAGTTCTGAGAAACCAGTTACTTCTGACTCAGAAACTGTGAAGTCTGCAAAGgctagtaaaataattatttccaACAACTTGAAGGCAGATGATGTGCAGGTTGAATCTCATAAGCCTGCTATTATAATACGGCCTCCTACTGATACGGGTAGGGGGAAAGTCGATTCTCATAAACACTCAATTGTAATACGATCCCTAACAAATGTAGATAAAGACCCAGTGGAATCTCACAAGTCCTCAATTGTAATAAGACCACCAACAGAAACAGAGAGGGAACAAcctcacaaaaaaattatcataaaacgTACAAAGGACGCTATTGATCTGGACCAGGTCAGCCCTAGTGGAAACACAGGACTTGAGCacaggaaaacaaaaagaattgttgAATTGTCAAATTTTGAGAAGCACAGGAAACAGGAGACACTGTATTCAGCTGAAGAGCTGGTAAAACAGAAAGCTAAAGAGGAAAGAAGATGGTGGGAAGAGCAAGAGAAGAGGAGAAATGACAAGAGAATCAGAGAAGATAGAGCAAGGAGGCTTCATGaggaagaaatgagaaaagaacAGGAAAGGTTAGCTGAGTTAAGAAGATATGAAGAAGACattagaagagagagagaggaggaaGAACGGCAAAAagctaagaagaaaaagaaaaagaagaagcctGATATAAGAGAGGAGTACTTAGATGACCCCAGAACAAGAAGATATGATAAAAGGATTCTTGAAAGAGACCGGAGTGGAAAAAGGAGATCTGTTGTTGAGTTGGGTAAGTATGGCGCTGAGTATACGCCATCAGCAAAACGCCGTAGAGGGGGAGAGgtTGGTTTGGCAAATATCTTGGAGCGCATTGTGGATAGTCTCAAGGAAAACATTGAAGTGTCCTATCTTTTCCTGAAACCAGTGTCCAAGAAAGAGGCTCCTGATTACCTGGACATTATAAAGCGGCCTATGGATCTTTCCAGAATCAGGGAGAAGGTGAGGAATATGGAGTACAAGAGCCGTGAAGAGTTCAGACATGATGTCTGGCAGATTACTTATAATGCCCATAAGTATAATGATGGGCGGAATCCAGGAATACCTCCCCTTGCGGATCAGCTATTGGAGCTTTGtgattatttgttaaatgagAATGATGAGAGCCTCACTGAAGCTGAAGCTGGTATTGAAACTAGGGACTTCTA 5957 0.3972 MEGKTDDKSMGRAIVLHLVAGNVEPHNAAVAPRIAQSHVDGKPSYELGVLRKEEGDIKRRRREARGLNLRSELVCLHNMGYDSDSPSQDGREEDDDEEYEEGGKGNRLLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDLSGKSPQTPADVVEQDYGEKAEDAVDYEDIDEEYDGPESEAANEEDHLLPKKEFFSAGASLEVLESRASVFDDENYDEESEKEQDLVNDNIEVADISLSGEQVESLAVASKGETALEHDLQVDSLQNEVLDIDEQNLQVEGPEVQKGSTPLPVLCVEDGMVILRFSEIFGIQKPPRKGEKKEHRHSVSRDRYKSFDLSNMVEDDEEAFLKGSSHNLSLIKKASVVQNGTSENNDVDSEFPKFGYIHGASSMAVKEGRRQKDACLSAEPMKVDFTGDLSWKEQSLSSANFYPLDQLDWEDEILWGNSPASRDNYIESCEISGFDSGSSECGEIEIGSRIQNLQLEPQKELEEKNHSIVMCSSPVSLESFGSGDSLGAKTNELSKSVFHPQLLRLEFRSEGNISSPVDGRRENVLEEHNQSDLMKRFTKVSSQNRDMMEDSWLDKIIWDPDRPIVKPKLIFDLQDDQMHFEVLDNKDGRHFCLHAGAMILTRSVKSSNGDSSELSGHGGQHGWRYVANDKHYSNRKTSQQLKSNSKKRSAHGVKVFHSQPALKLQTMKLKLSNKDIANFHRPKALWYPHDNEMAVKEQGKLPTQGPMKIIMKSLGGKGSKLHVDAEETLSSVKAKASKKLDFKLPEAVKIFYLGKELEDHKSLAAQNVQPNSLLHLVRTKIHLWPRAQRVPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNVGMGARLCTYYQKSSPDDQTGSFLRNTCDNLGHVISLDPSDKSPFLGDFKSGCSQSSLETNMYRAPTFPHKVPLTDYLLVRSSKGKLSLRRIDKINVVGQQEPLMEVLSPGSKNLQTYMMNRQLVHMCREFQAVEKRHLPPYIRVDELLSQFPYLSEASFRKRIKEFANLQKGTNGQSILVKKRNFRMWSEEELRKMVTPELVCAYESMQAGLYRLKHLGITETHPTNILSAMSRLPDDPIQLAAASHIERELQITPWNLSSNFVACTSQGKENIERMEITGVGDPSGRGMGFSYARAPPKAPVSSAMVKKKTAAGRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSSEQAAAGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQCLSAVNGDENESDSEENSDLDSFAGDLENLLDAEECEEGEEGTNDSKRDKADGVKGGLKMRRHPTMVQAEEEIEDEAAEAAELCRLLMDDDEADRKKKKKTKIIGEESALVPKLQSRYGFDNKDQVKQINNTVQVSGANILREDGVRNVREEENTPVKKSKSAKVKTMKKNGDIPINLLNKKLKIAGDGIKVFKEKKSARESFVCGACGQLGHMRTNKNCPKYGEDLESQLESTDMEKTSGKPSSLDPSSQPQQKTLAKKLSKSATKSAPVEAQEGEKSSLKTKVLPVKFKCSSTEKPDKLAIEALQSSEKPVTSDSETVKSAKASKIIISNNLKADDVQVESHKPAIIIRPPTDTGRGKVDSHKHSIVIRSLTNVDKDPVESHKSSIVIRPPTETEREQPHKKIIIKRTKDAIDLDQVSPSGNTGLEHRKTKRIVELSNFEKHRKQETLYSAEELVKQKAKEERRWWEEQEKRRNDKRIREDRARRLHEEEMRKEQERLAELRRYEEDIRREREEEERQKAKKKKKKKKPDIREEYLDDPRTRRYDKRILERDRSGKRRSVVELGKYGAEYTPSAKRRRGGEVGLANILERIVDSLKENIEVSYLFLKPVSKKEAPDYLDIIKRPMDLSRIREKVRNMEYKSREEFRHDVWQITYNAHKYNDGRNPGIPPLADQLLELCDYLLNENDESLTEAEAGIETRDF 1985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01052 1985 PANTHER BNAA01G26290D PROTEIN 92 1375 - -
Bva08g01052 1985 PANTHER BNAA01G26290D PROTEIN 1423 1980 - -
Bva08g01052 1985 MobiDBLite consensus disorder prediction 78 105 - -
Bva08g01052 1985 SUPERFAMILY TAF(II)230 TBP-binding fragment 101 140 IPR036741 -
Bva08g01052 1985 Pfam Ubiquitin family 749 817 IPR000626 GO:0005515
Bva08g01052 1985 PRINTS Bromodomain signature 1932 1951 IPR001487 GO:0005515
Bva08g01052 1985 PRINTS Bromodomain signature 1914 1932 IPR001487 GO:0005515
Bva08g01052 1985 PRINTS Bromodomain signature 1898 1914 IPR001487 GO:0005515
Bva08g01052 1985 PRINTS Bromodomain signature 1884 1897 IPR001487 GO:0005515
Bva08g01052 1985 MobiDBLite consensus disorder prediction 144 176 - -
Bva08g01052 1985 Gene3D - 727 817 - -
Bva08g01052 1985 ProSitePatterns Bromodomain signature. 1886 1943 IPR018359 -
Bva08g01052 1985 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1423 1980 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Bva08g01052 1985 SUPERFAMILY Ubiquitin-like 715 815 IPR029071 -
Bva08g01052 1985 SUPERFAMILY Bromodomain 1860 1973 IPR036427 GO:0005515
Bva08g01052 1985 ProSiteProfiles Bromodomain profile. 1881 1951 IPR001487 GO:0005515
Bva08g01052 1985 Pfam Protein of unknown function (DUF3591) 665 1231 IPR022591 -
Bva08g01052 1985 Coils Coil 1348 1368 - -
Bva08g01052 1985 MobiDBLite consensus disorder prediction 672 691 - -
Bva08g01052 1985 MobiDBLite consensus disorder prediction 1323 1339 - -
Bva08g01052 1985 SMART bromo_6 1861 1971 IPR001487 GO:0005515
Bva08g01052 1985 SMART ubq_7 745 817 IPR000626 GO:0005515
Bva08g01052 1985 MobiDBLite consensus disorder prediction 1317 1339 - -
Bva08g01052 1985 Pfam TATA box-binding protein binding 95 139 IPR009067 -
Bva08g01052 1985 CDD Ubl_TAFs_like 745 816 - -
Bva08g01052 1985 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 92 1375 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Bva08g01052 1985 Gene3D - 1846 1984 IPR036427 GO:0005515
Bva08g01052 1985 MobiDBLite consensus disorder prediction 1518 1551 - -
Bva08g01052 1985 Coils Coil 1768 1812 - -
Bva08g01052 1985 MobiDBLite consensus disorder prediction 1511 1562 - -
Bva08g01052 1985 Gene3D - 92 146 IPR036741 -
Bva08g01052 1985 MobiDBLite consensus disorder prediction 1795 1820 - -
Bva08g01052 1985 Pfam Bromodomain 1872 1947 IPR001487 GO:0005515
Bva08g01052 1985 ProSiteProfiles Ubiquitin domain profile. 745 815 IPR000626 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01052 745 815 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 40.845 1.43e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01052 K03125 - gmx:100780733 2780.74