Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01051 ATGTCCCTTCTTAGTAGATTCTTCTACAAAAGGCCCCCAGATGGGTTGCTTGAATTTGTCGATAGAGTATATGTTTTTGATTCTTGCTTCTCCACCGAAGCATTGCCTGATGGAATGTACCAAATTTATCTGCATGAAATCATTAATGAGTTATATGAAGAATTCCCGGAATCGAGGTTTCTCGCTTTCAATTTTCGTGAAGGTGAGAAACGCAGCCAATTTGCTGAAATTCTTTGTGAATACGATGTTGTTGTCTTCGATTTCCCCCGACAATACGAAGGTTGTCCCCTTCTTCCATTGTCTTTGGTTCAACATTTTCTTCGCGCTTGTGAGAGTTGGCTTTCCCTTAGGAATCAACAAGATGTGATCCTTCTCCACTGTGAGAGGGGGGGTTGGCCTCTCTTAGCGTTCCTTTTAGCtagctttttaattttccgAAGGCTGCATAGTGGGGAGCGTAGAACTCTTGAAATGGTGCATAAGGAGGCACCCAGAGGTTTCTTACAGCTATTGTCACCTTTGAATCCCTTGCCATCTCAGCTTCGTTACATTCAATATGTAGCAAGAAGGAATATAACTCCTCAGTGGCCCCCGAGCGAGCGAGCTCTTTCTCTAGATTGTGTCATTCTCCGAGCCATTCCTAGTTTTGATTCCCACAATGGCTGCAGACCACTTATCCGCATTTTTGGTAGAAATCTTCTTAGCAAGGATGGGCTTTCTACCCACATGCTCTATTCTatgcacaagaaaaagaagaatttaagGCATTACCGCCAGGCAGACTGTGATGTGATCAAGATTGACATTCAATGTTCAGTACAAGGCGACGTGGTATTGGAGTGTGTCCATTTGGACTTGGATCCGGAAAGGGAAATAATGATGTTTCGTGTAATGTTCAACACAGCTTTTATTCGGTCCAACATATTGATGCTGAACACTGAAAACTTGGACGTTCTTTGGGATTCAAAGGACCGGTACCCAAAAGGCTTCCGGGCAGAGGTTTTATTTGGAGAGGTTGAGAGTATATCTCCTCTAAGGGCACCAACAACCATTTTAAATGGTGAGGAGAAGGGTGGATTGCCCATAGAAGCTTTTTCAATGGTCCAAGAACTTTTTAGTGGTGTTGAGTGGGTTGATAGTGGGGATGATGCTGCCGTCTGGTTGCTTAAACAACTTTCTGTCTTAAGTGATGTCAAAGAGCTTTCAAGGTTGCAAACTAAAGCAAGTTGCTACTCTTCACCTGCTGATtctgaagatgaaaataatgaatcaAGCACTGCTGATAGTTCAGATGAAGCATTTGATGTCAATCCCAAATCTTCTGCTGATCCACTGAAATCATTGACATCTGAAAACCATGGTCCAGTCCATTTAGCTTATGAAAGTGATGGCGGAAATCTTGTAAATCTCACTTCTGATCATTCATCAATTGAAAATGTTCCATCATCTCTCAACTCTGCTAGTAAAATCTTTTCTCCGTGTTCATCTCCATCATCACCTCCCTCTCTGCCACCAACAAAAGCAGctccacctccacctccacctccacctcTACCCATGTATAACAAAGGGCCTCCTCTAGCTTTGTCTCCACAACCTCCTCTACCTCCACCTTCTATGGTAGCCAGTAAAGGGCCTCCTCTACcacctcctcctccttctCCACATCTTTCTAATATCGATAAAGATCTTGGGATATCTTCAACATCTTCAGCTACAAATAAAGGCCCTTTGCGACCTCCTCCCCCACCACCACCTCCACTACCCCCTTTCCTCTCTAGCAAAGCTCCCCCACCTCCCCCTAACCGATCAACTTCTAACGAACAAACTTTGTTGTCACTGCCACCCCCTCCAccacctccaccaccacctctCCCTCATCCATCAACTTCTATTCAACAAAGGTCGCCACCAATGGCACCTCCACCACCCCCACCTCCTCCACCTCTACTGTCAAACGTAACAGCTTCATCATCTGCCTCAAAACCTACCCAAGGGGTACGACCGCCTCCTCCTCCCATAGGTAACAATGCCGGCAATGCTAATAATGGTCCAAGACCGCCTCCACCTCCTTTAGGTCGTAATGCTAATAATGGTCCAAGAccacctccacctccacctccacctccTTTAGGTCATAATGCTAATAATGGTCCAAGACCACCTCCACCTCCGCCTCCGCCTCCACCTCCTCTTGGTTGTAATGCTAATAATGGTCCAACACCTcctccacctccacctccTCCAGGACCTGTACGAACAGGTTCAGGACCCCCACCTGCACCTCCAGCACCAAGGCCTCCAAATGCTCCCCCACCACCACCTAGTCGGGGTGCAGCACCAGCTCCACCTCCACCTCCTATGGCCAAGGGTTCTGGTGCACCCCCGCCCCCACCTCCGTCTATTGCAAAAGGTAAAGCTTCAACAATTGGTGGGAGAAGTCGAGGTACTGCTGGAACTGCTATGGCCCCTAAGAAAACTTCATTAAAACCTTTACATTGGGTGAAAGTTACTCGAGCTATGCAAGGGAGTCTATGGGCTGATTCACCGAAGCAAGATAATCAATCAAGGGCCCCTGAAATAGATATATCAGAACTTGAGAGTCTCTTCTCAGCAGCATCTGCTTCTGATGGAAGCAGTGCTAAAGGTGGAGGTCGGCGTGGTTCTAATATTAACAAACCTGAGAAAGTACAATTGATTGACTTGCGGAGAGCCTATAATTGTGAAATCATGctgtcaaaaatcaaaattcccTTGCCAGATATGCTTAATGCAGTTCTGGCGTTGGATTCTTCTGTTCTTGACATTGATCAGGTTGAGAACCTCATTAAATTCTGTCCCACAAAGGAAGAGATGGAAATGTTGAAGAATCATACAGGGAACAAGGAAATGCTTGGAAAATGTGAACAGTTTTTCATGGAGCTGATGAAGGTTCCCCGAGTAGAATCTAAGTTACGAGTATTTGCTTTTAAAATCACCTTTTCTAGTCAGGTGAACGAATtgagattaaatttgaatacGATCAATGATGCATCTAGAGAGGTGAAAGAATCTGTGAAGTTGCGTCAAATTATGCAAACTATTCTTACATTAGGCAATGCCTTGAATCAAGGAACAACACGAGGATCCGCAGTAGGGTTCAAATTGGATAGCCTTCTTAAGTTATCTGATACTCGTgcaagaaataacaaaatgacTTTAATGCATTATTTATGTAAGCTTCTTTCTGAGAAAATGCCAGAATTGCTAGATTTTGACAAGGATCTTGTCCATTTAGAAGCGGCATCTAAGATACAATTAAAAGCATTGGCTGAAGAAATGCAAGCTGTGAGTAAAGGTCTAGAGAAAGTTGAGCAAGAGCTCACTGCTTCAGAAAACGATGGTGCTATATCTTCAGGGTTTCGCAAGGTTCTGAAGAATTTCCTTGATATCGCTGAAGCAGATGTGAGGTCACTTATATCATTGTATTCTGAAGTGGGACGAAATGCAGATTCTCTGTCTCTGTACTTTGGAGAGGATCCTGCTCGGTGCCCCTTTGAGCAAGTGACACAAATCCTGGTTGTATTTGTTAAGATGTTTAACAAGTCAAGAGAGGAGAATGAAAGGCAGGCAGatcttgaaaagaagaaactagaaaaagaagcaatgaAGGAACGAACTGCAACTAATGCACTAGCGAAGGAACGAACTGCAACTAATGCACTAGCCAAAAAAGATGGGTTTTG 3725 0.4137 MSLLSRFFYKRPPDGLLEFVDRVYVFDSCFSTEALPDGMYQIYLHEIINELYEEFPESRFLAFNFREGEKRSQFAEILCEYDVVVFDFPRQYEGCPLLPLSLVQHFLRACESWLSLRNQQDVILLHCERGGWPLLAFLLASFLIFRRLHSGERRTLEMVHKEAPRGFLQLLSPLNPLPSQLRYIQYVARRNITPQWPPSERALSLDCVILRAIPSFDSHNGCRPLIRIFGRNLLSKDGLSTHMLYSMHKKKKNLRHYRQADCDVIKIDIQCSVQGDVVLECVHLDLDPEREIMMFRVMFNTAFIRSNILMLNTENLDVLWDSKDRYPKGFRAEVLFGEVESISPLRAPTTILNGEEKGGLPIEAFSMVQELFSGVEWVDSGDDAAVWLLKQLSVLSDVKELSRLQTKASCYSSPADSEDENNESSTADSSDEAFDVNPKSSADPLKSLTSENHGPVHLAYESDGGNLVNLTSDHSSIENVPSSLNSASKIFSPCSSPSSPPSLPPTKAAPPPPPPPPLPMYNKGPPLALSPQPPLPPPSMVASKGPPLPPPPPSPHLSNIDKDLGISSTSSATNKGPLRPPPPPPPPLPPFLSSKAPPPPPNRSTSNEQTLLSLPPPPPPPPPPLPHPSTSIQQRSPPMAPPPPPPPPPLLSNVTASSSASKPTQGVRPPPPPIGNNAGNANNGPRPPPPPLGRNANNGPRPPPPPPPPPLGHNANNGPRPPPPPPPPPPPLGCNANNGPTPPPPPPPPGPVRTGSGPPPAPPAPRPPNAPPPPPSRGAAPAPPPPPMAKGSGAPPPPPPSIAKGKASTIGGRSRGTAGTAMAPKKTSLKPLHWVKVTRAMQGSLWADSPKQDNQSRAPEIDISELESLFSAASASDGSSAKGGGRRGSNINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMLNAVLALDSSVLDIDQVENLIKFCPTKEEMEMLKNHTGNKEMLGKCEQFFMELMKVPRVESKLRVFAFKITFSSQVNELRLNLNTINDASREVKESVKLRQIMQTILTLGNALNQGTTRGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLSEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISSGFRKVLKNFLDIAEADVRSLISLYSEVGRNADSLSLYFGEDPARCPFEQVTQILVVFVKMFNKSREENERQADLEKKKLEKEAMKERTATNALAKERTATNALAKKDGF 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01051 1241 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 202 339 IPR035892 -
Bva08g01051 1241 SMART it6_source 578 1239 IPR015425 -
Bva08g01051 1241 Pfam Formin Homology 2 Domain 823 1194 IPR015425 -
Bva08g01051 1241 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Bva08g01051 1241 MobiDBLite consensus disorder prediction 497 557 - -
Bva08g01051 1241 MobiDBLite consensus disorder prediction 476 496 - -
Bva08g01051 1241 ProSiteProfiles Formin homology-2 (FH2) domain profile. 819 1219 IPR015425 -
Bva08g01051 1241 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Bva08g01051 1241 MobiDBLite consensus disorder prediction 561 575 - -
Bva08g01051 1241 MobiDBLite consensus disorder prediction 408 460 - -
Bva08g01051 1241 Coils Coil 1100 1127 - -
Bva08g01051 1241 Pfam C2 domain of PTEN tumour-suppressor protein 200 337 IPR014020 -
Bva08g01051 1241 MobiDBLite consensus disorder prediction 1202 1224 - -
Bva08g01051 1241 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 19 187 IPR029021 -
Bva08g01051 1241 MobiDBLite consensus disorder prediction 476 827 - -
Bva08g01051 1241 SUPERFAMILY Formin homology 2 domain (FH2 domain) 832 1213 - -
Bva08g01051 1241 MobiDBLite consensus disorder prediction 872 892 - -
Bva08g01051 1241 PANTHER FORMIN-J 1 740 - -
Bva08g01051 1241 PANTHER FORMIN-J 741 1229 - -
Bva08g01051 1241 Gene3D Formin, FH2 domain 819 1205 IPR042201 -
Bva08g01051 1241 MobiDBLite consensus disorder prediction 872 886 - -
Bva08g01051 1241 MobiDBLite consensus disorder prediction 1202 1241 - -
Bva08g01051 1241 MobiDBLite consensus disorder prediction 576 604 - -
Bva08g01051 1241 MobiDBLite consensus disorder prediction 612 652 - -
Bva08g01051 1241 SMART PTEN_C2_2 198 338 IPR014020 -
Bva08g01051 1241 MobiDBLite consensus disorder prediction 427 448 - -
Bva08g01051 1241 Gene3D - 197 342 - -
Bva08g01051 1241 MobiDBLite consensus disorder prediction 683 803 - -
Bva08g01051 1241 Coils Coil 1194 1228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01051 Bva-Chr8 5377955 5386599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01051 1 476 FH2 protein (formin) Gene Family AT1G31810 71.429 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01051 - - qsu:111989230 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01051 08 5377955 5386599 Bva08g01051 08 5377955 5386599 ECH