Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01044 ATGTTTGGAGGGGGAGATGAGGAGGCCTTGGCTCACTTGCGCATGATGACGCCGTCCTTCTTGAATCCAGCTACGTCGTCGGTTATCTCTGCTGAGATACCGACGTCGACAGCGGCTTCGGCGGCAGCGGCGGGAAGGGAGGAAAGGGGTCCCACTCAGCCACAGTGGAGCCAGCAGGAGACGAGGGAGTTCATAGCGATTCGTGCGGAGCTGGAGAGGGACTTCACTACATCAAAGCGAAATAAGACACTTTGGGAGGTCGTGAGCGCCAAAATGAGGGAGAGAGGCTTCAGGAGGAGCCCCGAACAGTGTAAATGCAAGTGGAAGAACCTTGTGAACCGTTATAAGGGGAAAGAGACATCGGATCCAGAGCATGGCAAGCAATGCCCCTTTTTTGAAGAATTGCATGCAGTCTTTACCCAAAGAGCACTGAACATGCAGCGATTACTTCTTGAATCTGAAACCCGTTCAACTCAAGCAAAAAAGGGTGTGAAGAGATCCAGTGGAGATCGAACCTCTGAGGAGTTCTCAGAGGACTATGATGAGTTTGATTATGACAGCGAAGAGGAGAGACCACCTAGAAGCAACTCTCGCAAAAGGAAAGCTGACAATGTCGTCACGGAGAAGTCTTCAAGGGCGAGCAACGTGTCAAATTCTATCAGCAATGCTGCCAGTAGTATACAGGAAATGCTTAAGGATTTTTTCCAGCAGCAGCTAAGGATGGAGATGCAGTGGAGGGAGTTGATGGAAAGGCGTGCCCATGAAAGGCAGTTATTTGAGCAGGAATGGCGACAGTCAATGGAGAAGCTTGAGAGGGAGAGATTGATGATTGAGCAGGCATGGAGGGAGAGGGAAGAACAGAGGCGAATTAGAGATGAGAGCCGAGCAGAGAGGAGAGATGCTTTGTTAACAACCCTTTTGAACAAACTCACCCATGAATCTAATTA 947 0.4995 MFGGGDEEALAHLRMMTPSFLNPATSSVISAEIPTSTAASAAAAGREERGPTQPQWSQQETREFIAIRAELERDFTTSKRNKTLWEVVSAKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHGKQCPFFEELHAVFTQRALNMQRLLLESETRSTQAKKGVKRSSGDRTSEEFSEDYDEFDYDSEEERPPRSNSRKRKADNVVTEKSSRASNVSNSISNAASSIQEMLKDFFQQQLRMEMQWRELMERRAHERQLFEQEWRQSMEKLERERLMIEQAWREREEQRRIRDESRAERRDALLTTLLNKLTHESN 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01044 315 Coils Coil 260 280 - -
Bva08g01044 315 CDD GT1 54 119 - -
Bva08g01044 315 PANTHER - 38 313 - -
Bva08g01044 315 MobiDBLite consensus disorder prediction 155 217 - -
Bva08g01044 315 MobiDBLite consensus disorder prediction 158 174 - -
Bva08g01044 315 MobiDBLite consensus disorder prediction 32 59 - -
Bva08g01044 315 ProSiteProfiles Myb-like domain profile. 56 112 IPR001005 -
Bva08g01044 315 SMART sant 52 114 IPR001005 -
Bva08g01044 315 Pfam Myb/SANT-like DNA-binding domain 54 137 IPR044822 -
Bva08g01044 315 Gene3D - 56 117 - -
Bva08g01044 315 MobiDBLite consensus disorder prediction 187 207 - -
Bva08g01044 315 PANTHER - 38 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01044 Bva-Chr8 5337659 5340324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01044 35 315 Trihelix Transcription Factor Family AT2G38250 42.456 3.75e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva08g01044 Myb_DNA-bind_4 9.5e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01044 - - gmx:100812635 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01044 08 5337659 5340324 Bva08g01044 08 5337659 5340324 ECH