Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01041 ATGGGACCCAAGCAGGGTCTGAGTAATGTTTTGACCAAAGCAAACCATTCAGGCAATATGAACGAAAACGTCGGTCGCACGAACGGTGTGTCTGGTTCTCACGTGCCAAACAGCTTAGCTCTCATTGGTTGTGCTGATGCTCCTTTTAATTCCCAAGCATCTAGTTACGCACAGTCCCTCACTCGCACACTCACATCACACACTCTTCGGAATCACACAAATCTCAGGCACGAAGGTGAGAGAGAGGAGGTTTTGTTGTTATTCCTTTACAGCTCAACCTCCTACATTTCTCTTACTTCTCTAGCATCTTGGATCGAATCCAGttACTACAGTGTGGCTATGGACATTTGTCTGATGAAATGGCAATTGCCGTGGCTGATCTATGTTCTGCTAATGCATActatcatcaataaaaatgaagcGATTAGTCCAGATGGTGAGGCACTTCTCAGCTTCAAGACAGCAGTTGTTAACTCAGATGGTATTCTTTTACAGTGGAGGCCTGAGGATCCTGACCCTTGTGATTGGAAAGGAGTAAAGTGCGATGAGAAAACCAAGAGAGTAACATCTCTGATTCTAGCTCGCCACAAGTTGAGTGGGTCTATAGTGTCTGACCTTGGGAAGCTAGAGCATCTGAAGATCCTTGCTCTTCACAACAACAACTTCTATGGGACAATTCCATCAGAACTGGGAAACTGTACTGAGTTGCAGGGAATATTCTTGCAGGGTAATTACCTTAGTGGTATGATTCCAAGTGAATTAGGAAACCTTTCAGAGCTTAAAAATTTGGATATATCTAGCAACTCCCTCAGTGGGAATATTCCTTCATCACTTGGGAAGTTATATAATCTCCGGAATTTCAATGTGTCAACCAATTTTCTGGTGGGACCAATACCATCTGATGGTGTGCTTGCAAACTTTACTGAAAGCTCCTTTGTTGGAAATCGTGGTTTGTGTGGAGTGCAAAACAATATAACATGTAAAGGTTCGCCAACAACAAATCCTCAATCTCCAACCTCAGaccaaaatcaaaatggaaagaaaaaatattctgGCCGGTTACTTATCAGTGCATCAGCAACTGTGGGCGCCCTACTTTTGGTGGCACTTATGTGTTTCTGGGGTTgctttctttataaaaagttCGGTAAAAATGATGGAAAAACTCTGGCAATGGATGTCAGTGGAGGTGCATCCATTGTTATGTTTCATGGAGATCTACCATATTCTTCCAAAgacattattaaaaaactagAGACTTTGAATGAGGAACACATAATAGGTTGTGGAGGATTCGGAACAGTTTACAAGCTCTCAATGGATGATGGGAATGTATTTGCTTTAAAAAGGATCGTAAAGTTGAATGAAGGCTTTGATCGGTTTTTTGAGAGGGAGCTTGAAATTCTGGGAAGCATAAAACACCGTTATCTAGTTAATTTACGAGGTTATTGCAATTCACCTACATCAAAATTGTTGATATATGATTACCTGGCTGGTGGTAGTCTTGATGAAGCTCTTCATGAAAAATCTGAGCAACTAGACTGGGATTCACGCTTGAATATAATCATGGGAGCTGCAAAAGGACTTGCCTACTTGCACCATGATTGTTCCCCCAGGATCATACACCGAGACATAAAGTCAAGCAACATTTTACTTGATGGCAACCTGGATGCTCGAGTCTCTGATTTTGGACTCGCCAAACTTTTGGAGGATGAAGAATCTCACATCACAACAATTGTTGCAGGAACATTTGGTTACCTAGCTCCAGAGTATATGCAAAGTGGCAGAGCAACTGAGAAGActgatgtttatagttttggtgTTTTGGTGCTTGAAGTGCTGAGTGGAAAGCGACCAACAGATGCATCATTCATCGAAAAGGGTCTCAATATTGTTGGTTGGTTGAATTTTCTCATTACTGAAAATAGGCAAAGAGAGATTGTAGATCCGCAATGTGAGGGAGTACGGTTGGAGAGCCTCGATGCCTTGCTTTCTGTGGCTATTCAGTGTGTTTCTTCAAGTCCGGAGGATCGTCCCACCATGCATAGAGTGATCCAGTTGCTTGAATCAGAAGTCATGACCCCATGCCCAAGTGAGTTCTATGATTCCAACTCTGACTA 2120 0.4071 MGPKQGLSNVLTKANHSGNMNENVGRTNGVSGSHVPNSLALIGCADAPFNSQASSYAQSLTRTLTSHTLRNHTNLRHEGEREEVLLLFLYSSTSYISLTSLASWIESSYYSVAMDICLMKWQLPWLIYVLLMHTIINKNEAISPDGEALLSFKTAVVNSDGILLQWRPEDPDPCDWKGVKCDEKTKRVTSLILARHKLSGSIVSDLGKLEHLKILALHNNNFYGTIPSELGNCTELQGIFLQGNYLSGMIPSELGNLSELKNLDISSNSLSGNIPSSLGKLYNLRNFNVSTNFLVGPIPSDGVLANFTESSFVGNRGLCGVQNNITCKGSPTTNPQSPTSDQNQNGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDGKTLAMDVSGGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGCGGFGTVYKLSMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLAGGSLDEALHEKSEQLDWDSRLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLITENRQREIVDPQCEGVRLESLDALLSVAIQCVSSSPEDRPTMHRVIQLLESEVMTPCPSEFYDSNSD 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01041 706 Gene3D Phosphorylase Kinase; domain 1 395 496 - -
Bva08g01041 706 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 116 706 IPR031071 GO:0004672|GO:0005524|GO:0030244
Bva08g01041 706 Gene3D Ribonuclease Inhibitor 143 328 IPR032675 -
Bva08g01041 706 MobiDBLite consensus disorder prediction 8 29 - -
Bva08g01041 706 SUPERFAMILY L domain-like 143 308 - -
Bva08g01041 706 PANTHER RECEPTOR-LIKE PROTEIN 55 116 706 - -
Bva08g01041 706 SMART serkin_6 421 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01041 706 SUPERFAMILY Protein kinase-like (PK-like) 404 688 IPR011009 -
Bva08g01041 706 ProSiteProfiles Protein kinase domain profile. 421 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01041 706 Pfam Leucine rich repeat N-terminal domain 144 182 IPR013210 -
Bva08g01041 706 Pfam Protein kinase domain 423 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01041 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 540 552 IPR008271 GO:0004672|GO:0006468
Bva08g01041 706 Gene3D Transferase(Phosphotransferase) domain 1 497 695 - -
Bva08g01041 706 ProSitePatterns Protein kinases ATP-binding region signature. 427 453 IPR017441 GO:0005524
Bva08g01041 706 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01041 Bva-Chr8 5317889 5326864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01041 114 697 Receptor kinase-like Gene Family AT2G35620 76.239 0.0 896
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Bva08g01041 Pkinase 9.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01041 - - adu:107487087 1064.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01041 08 5317889 5326864 Bva08g01041 08 5317889 5326864 ECH