Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01035 ATGAAGGAACCTCAACCAACAAAGCCATGGAGGCCTTTCACGGCAAAGTACTGCTGCTCCACTGAGGACCAAACCGTCTTTGGCAGCTTGAGCCGAGCCTGCAGGCCCTCGCGTTCTGATTTCTCTAAGGACATAGCTCCGTTACCTTCGTTTCGGAGATTGTCTTTCTCTGATCTTAGCCGTTCGTCTTCGATGAGAATCAATGAAGATCTTGCTCAGTCTTTTGGTTCAGATTTGTATGATTTTCAGCTGAGCGAGTTGCGTGCCATAACCCAGAATTTCTCGAGCAATTACTTGTTGGGTGAAGGTGGGTTTGGAACGGTGCATAAGGGTTATATAGATGATAACTTGAGGCAGGGCTTGAAGGCTCAGCCTGTAGCAGTTAAGCTCCTGGATATTGAAGGCTTACAAGGACATCGCGAATGGCTTGCAGAAGTGATATTTCTTGGGCAGCTGAGGCACCCTAATTTGGTCAAACTAATTGGGTATTGTTGTGAGGATGAAGAACGACTTCTTGTGTATGAATTCATGCCTCGAGGAAGCTTGGAGAATCACCTCTTCAGAAGGATAACATCACTGCCATGGGCGACAAGATTAAGAATTGCAATAGGTGCAGCCAAAGGCCTTGCCTTTTTGCATAACGCTGAGAACCCTGTCATATACCGTGACTTCAAGACCTCCAATGTCTTGCTTGATTCAgaTTTTACTGCTAAACTGTCAGATTTTGGACTAGCAAAAATGGGTCCAGAGGGATCAAACACCCACGTCACAACAAGGGTAATGGGCACCTATGGATACGCAGCGCCCGAATATATCTCAACAGGACACCTAACCACCAAAAGTGATGTCTACAGCTTTGGAGTAGTCCTACTGGAACTACTCACAGGAAGGAGAGCAATGGACAAGACAAAACCAAAGACAGAGCAAAACCTTGTGGATTGGACAAAACCTTACTTGAGCAGTAGCAGGAGATTAAGACACGTAATGGATCCAAGGCTTGCAGGGCAATACTCTGTAAAGGGTGCAAAGGAGGTGGCAGTTTTGGCATCGCAATGCACAAGTTTGAATCCCAAAGACAGGCCAAGGATGCCAACAATCGTTGAGACTCTTGAGAGCCTGGAACAGTTCAAGGACATGGCAGTTACCTGCGGACACTGGCCGGCATCGCCGAAATCTGCTAGGAATGCTTCCAATAAGGTCAAAATTGATATCAGAGCTGGTGCAACTGCAACACACAGGAAACCTTATCCTGTATTTGCAGGCAAAAACActtg 1274 0.4631 MKEPQPTKPWRPFTAKYCCSTEDQTVFGSLSRACRPSRSDFSKDIAPLPSFRRLSFSDLSRSSSMRINEDLAQSFGSDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDNLRQGLKAQPVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEDEERLLVYEFMPRGSLENHLFRRITSLPWATRLRIAIGAAKGLAFLHNAENPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRAMDKTKPKTEQNLVDWTKPYLSSSRRLRHVMDPRLAGQYSVKGAKEVAVLASQCTSLNPKDRPRMPTIVETLESLEQFKDMAVTCGHWPASPKSARNASNKVKIDIRAGATATHRKPYPVFAGKNT 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01035 424 CDD STKc_IRAK 100 373 - -
Bva08g01035 424 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL15-RELATED 35 409 - -
Bva08g01035 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Bva08g01035 424 Gene3D Phosphorylase Kinase; domain 1 57 176 - -
Bva08g01035 424 ProSiteProfiles Protein kinase domain profile. 94 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01035 424 ProSitePatterns Protein kinases ATP-binding region signature. 100 129 IPR017441 GO:0005524
Bva08g01035 424 Pfam Protein tyrosine and serine/threonine kinase 99 370 IPR001245 GO:0004672|GO:0006468
Bva08g01035 424 SUPERFAMILY Protein kinase-like (PK-like) 76 371 IPR011009 -
Bva08g01035 424 Gene3D Transferase(Phosphotransferase) domain 1 177 384 - -
Bva08g01035 424 PANTHER OS01G0588500 PROTEIN-RELATED 35 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01035 Bva-Chr8 5295295 5297875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01035 82 410 Glycoside Hydrolase AT3G07070 48.955 6.46e-104 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva08g01035 PK_Tyr_Ser-Thr 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01035 - - gmx:100814241 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01035 08 5295295 5297875 Bva08g01035 08 5295295 5297875 ECH