Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01027 ATGTGCATGGACTACCCACAGTTGAAGCAGAATGAGACGGCTTTTTTGTTGGGGCCCATCTCGCAAGTCACCGTCATTCTACTGCCAGTTGGAGATGTTGGTGACGTGTACCACCTCCAACAGACCAACGCCTGCCACGTTCGAAAACTCCACGGATTTTCATCCAATCTTGCGATTCACATGCACCCAATCACtgctcttcttctctttccaACACTCTGGGGTCGGTGGGTCACTACTATTGTAGAGCCGGCAGTATCCGAGGACACCCGCTGGTTTGCTTCTATCAAAACTTCCTGTATTTCACTAACCAGAATGATGGGCTCAAGATTAGGCCAATGGTTAAATCTTCTAGTATGCGTAGTGTTATTGCTGAAGGCAGAAGGACATGATGTGGGGATCACTTATCTCGAAAGTGCAGTAGCTAAAGGAGCCGTTTGCTTGGATGGGAGCCCACCAGCTTACCACTTTGATAAGGGATTTGGAGCAGGGGTTAACAACTGGATAATTCAGATGGAGGGTGGAGGCTGGTGCAACAATGCCACTACTTGCCTAGACCGGAAGAACACTCGTTTAGGTTCATCTAAGCAAATGGCTACAAAGGTTTCCTTTTCTGGAATGTTTAGTAACAAAGCAAAGTTCAATCCAGATTTCTACGACTGGAACAGAATCAAGGTTAGGTACTGTGATGGGTCATCATTTACTGGTGACGTGGAAGCAGTCAATCCAACCACCAAGCTATACTACAGAGGAGCAAGAGTTTTTAATGCTATCGTTGAGGATTTACTAGCAAAAGGAATGAAAAATGCTCAAAATGCTCTTCTTTCTGGTACTTCAGCTGGAGGATTGGCTGCTATATTGAACTGTGACCGCTTTCGAGCTCTATTGCCTGCTACTGCTACAGTGAAATGCCTTTCGGACGCTGGTTATTTTATCAATGCAAAGGATGTTTCTGGAACATCACACATTGAACAGTTCTACGCTCAAGTTGTGGCAACACATGGTTCGGCAAAGAATTTGCCTGCATCTTGTACTTCAAGACTCAGCCCAGGGCTGTGCTTTTTTCCTCAATACATGGTATCACAAATCCGTACACCAATCTTCTTTGTAAATGCAGCCTATGACTCATGGCAGATAAAGAACATTATAGCACCGGGCGTTGCTGACCCCCATGGTCGCTGGCGTAGCTGCAAgcttgatataaaaaaatgctcAACCGATCAACTCAATACGATGCAAGGCTTCAGGACTGAATTCTTAAGGGCAATTAGCGTGGTTGGCAAATCTCCATCAATAGGAATGTTCATAGACGCTTGCTATGCTCACGGCCAAATTGGAACGCAGGAAACATGGTTAAGAAATGACTCTCCCCTGCTGGCCAAGACAACAATTTCAAAGGCAGTGGGAGACTGGTATTATGGAAGAAATGCCTTCAAGGCGATTGATTGCCCTTACCCTTGCAATCCCACTTGTCACAACCGCGTTTTTGAATCAAAGGACGTTGCAGAAGCATTAGATTG 1520 0.4454 MCMDYPQLKQNETAFLLGPISQVTVILLPVGDVGDVYHLQQTNACHVRKLHGFSSNLAIHMHPITALLLFPTLWGRWVTTIVEPAVSEDTRWFASIKTSCISLTRMMGSRLGQWLNLLVCVVLLLKAEGHDVGITYLESAVAKGAVCLDGSPPAYHFDKGFGAGVNNWIIQMEGGGWCNNATTCLDRKNTRLGSSKQMATKVSFSGMFSNKAKFNPDFYDWNRIKVRYCDGSSFTGDVEAVNPTTKLYYRGARVFNAIVEDLLAKGMKNAQNALLSGTSAGGLAAILNCDRFRALLPATATVKCLSDAGYFINAKDVSGTSHIEQFYAQVVATHGSAKNLPASCTSRLSPGLCFFPQYMVSQIRTPIFFVNAAYDSWQIKNIIAPGVADPHGRWRSCKLDIKKCSTDQLNTMQGFRTEFLRAISVVGKSPSIGMFIDACYAHGQIGTQETWLRNDSPLLAKTTISKAVGDWYYGRNAFKAIDCPYPCNPTCHNRVFESKDVAEALD 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01027 506 PANTHER NOTUM-RELATED 109 500 IPR004963 GO:0016787
Bva08g01027 506 Pfam Pectinacetylesterase 126 477 IPR004963 GO:0016787
Bva08g01027 506 PANTHER PECTIN ACETYLESTERASE 109 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01027 Bva-Chr8 5262173 5266493 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01027 110 500 Carbohydrate Esterase AT4G19420 58.216 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01027 K19882 - cit:102628021 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01027 08 5262173 5266493 Bva08g01027 08 5262173 5266493 ECH