Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01025 ATGGATTGGGTATTCGTGCATAAAACATGGGATAAGTGGGCTTCTACCAGCGTTGGTTCTTCTGGCGAACCTTTAAAAGCTGCTTTGCTGATTAATTATGATCCAACTGGACCTTCTCGCTTGTTGTCTACCATCGCAGAACAAGAGGGAATAAAAGCTGATCCCATTGAATTGAGTCACTTTGTTGATTTCATTAAACGTAACAATTTACAGACAGAGAGTTTCATCATTGGGCCTAATCAATACTTGGTCACTTCAATTCATGATAATTGGTTTTCTGCAAGGTGCATTAATACATCAAAGCCTGCCGGTGAAGGTGCAATTGTTATACAAACTGCAGCATATATATTGGTTTCTCTGTATGAAGGTTCTATTGGTTCAGCATCTCGAGCCATGGCTGCTGCTGATCAGTTAGCTTGGCAATTGGGGCGGAAAAATCTTTA 443 0.4063 MDWVFVHKTWDKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEQEGIKADPIELSHFVDFIKRNNLQTESFIIGPNQYLVTSIHDNWFSARCINTSKPAGEGAIVIQTAAYILVSLYEGSIGSASRAMAAADQLAWQLGRKNL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01025 147 Pfam Profilin 9 144 IPR005455 GO:0003779
Bva08g01025 147 PANTHER OS05G0241400 PROTEIN 1 147 - -
Bva08g01025 147 Gene3D Dynein light chain 2a, cytoplasmic 9 146 - -
Bva08g01025 147 PANTHER OS05G0241400 PROTEIN 1 147 - -
Bva08g01025 147 SUPERFAMILY Profilin (actin-binding protein) 10 145 IPR036140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01025 Bva-Chr8 5249862 5252492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01025 1 147 Carbohydrate Esterase AT4G19410 69.595 1.90e-72 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01025 - - gmx:100811973 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01025 08 5249862 5252492 Bva08g01025 08 5249862 5252492 ECH