Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01023 ATGAACAGCATTAAAGACGATACTTCGAGACAAGATCTGGACCCTCAAAGTGACCATAGCTCCGATTATTTAGCTCACTCTCACTCTCACCATCAGCCCCATCTTCTCCCTTCCCAGCCTCAGGCACAGCCACAGCCACAGCCTCAGCCTCGCCGTCCTCGTGGCTTCGCTGCCACGGCGGCAGCTACGGCAGCTGCAACcggaaagggaaagaaagagagagaaaaggagaaggagCGTACCAAGCTCCGAGAGCGTCACCGTCGAGCAATTACGAGCCGTATGCTCGCGGGGCTTCGTCAGTATGGTAATTTTCCTCTCCCGGCACGTGCTGACATGAATGATGTACTCGCCGCGCTCGCACGTGAGGCTGGTTGGGTTGTGGAGGCCGATGGCACCACCTACAGGCAGTGTCCACCTCCTTCTCAAATGGCATCGTTTGCGGCAAGGTCAGTTGAAAGCCCACTCTCTGCTGGTTCACTGAGAGCTTCCTCTGTGAAAGAAACATTAGACAGTCAGCCACCGGCACTTAGAATAGATGAAAGCTTGTCACCTGCTTCCATTGATTCTGTTGTAATTGCAGAAAGGGATTCGAAAAGTGAGAAATACGCCAGTGCAAGCCCCATCAATCCAGTTGACTGCTTAGAGGCTGATCAGCTTATGCAGGATATTCATTCTGGGGAGCATGAGAATGATTTTACTGGCACACCGTATATTCCTGTTTATATAAAGCTGGCAGCTGGTATTATCAACAAGTTTTGCCAATTGATTGATCCTGAAGGTGTTAGACAGGACCTAATCCAATTGAAGTCCTTAAATCTCGATGGTGTTATCGTGGATTGTTGGTGGGGCATTGTTGAAGGATGGAGCCCTCAGAAATATGTGTGGTCTGGCTATAGGGAACTTTTTAACATCATTAGAGAATTCAAGCTGAAGTTGCAgGTTGTTATGGCATTTCATGAATGTGGGGGGAATGATTCCACCGATACATTAATTTCCCTCCCTCAATGGGTTTTGGAAATTGGAAAAGAGAACCAGGATATATTCTTCACAGATCGTGAAGGACGTAGGAATACTGAATGTCTTTCTTGGGGTGTTGACAAAGAGCGAGTTCTTAAGGGAAGAACAGGAATTGAGGTTTACTTTGATTTCATGAGAAGCTTTCGGACAGAGTTTGATGACTTATTTGCTGAAGGTCTCATTTCTGCTGTTGAAATTGGACTTGGAGCATCAGGGGAGTTGAAATATCCTTCGTTTTCAGAGAGAATGGGGTGGAGGTATCCTGGTATCGGTGAGTTTCAGTGCTATGATAAATACCTACAACAAAGTCTACGTAGAGCAGCTAAATTACGTGGTCACACTTTTTGGGCAAGAGGACCTGATAATGCTGGATACTACAATTCTATGCCGCATGAAACTGGGTTCTTTTGTGAGCGAGGTGATTATGACAATTATTATGGGCGCTTCTTCTTACATTGGTATGCCCAGTCGTTAATAGACCATGCAGATAATGTTTTGTCTCTTGCAAGCCTTGCATTTgaagagacaaaattaattgtcaaGGTTCCTTCAATATACTGGTGGTACAAGACTTCTAGTCATGCAGCAGAGTTGACAGCAGGATATCACAACCCCACGAACCAGGATGGATACTCTCCTGTTTTTGAGGTTCTGAGAAAACATTCCGTCACCATGAAATTTGTTTGCTTAGGATTTCAGCTTTCTAATCAGGAAGCAGATGAATCATTGACAGACCCGGAGGGTTTGAGTTGGcagGTTTTAAACTCGGCTTGGGATCGTGGGCTGACAGTAGCTGGAGAGAACGCACTCCTGTGTTATGATAGAGAAGGGTACAAGAGATTGGTTGAGATGGCTAAACCTCGGAATGATCCTGATCGTCGCCACTTCTCATTCTTCGTATTCCAACAGCCATCTTTGGTTCAGGGGAACATTTGCTTGTCAGAGTTGGATTACTTCATCAAATGTATGCATGGTGAGCTGGCAGGAGACCTATG 2015 0.4467 MNSIKDDTSRQDLDPQSDHSSDYLAHSHSHHQPHLLPSQPQAQPQPQPQPRRPRGFAATAAATAAATGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVEADGTTYRQCPPPSQMASFAARSVESPLSAGSLRASSVKETLDSQPPALRIDESLSPASIDSVVIAERDSKSEKYASASPINPVDCLEADQLMQDIHSGEHENDFTGTPYIPVYIKLAAGIINKFCQLIDPEGVRQDLIQLKSLNLDGVIVDCWWGIVEGWSPQKYVWSGYRELFNIIREFKLKLQVVMAFHECGGNDSTDTLISLPQWVLEIGKENQDIFFTDREGRRNTECLSWGVDKERVLKGRTGIEVYFDFMRSFRTEFDDLFAEGLISAVEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQQSLRRAAKLRGHTFWARGPDNAGYYNSMPHETGFFCERGDYDNYYGRFFLHWYAQSLIDHADNVLSLASLAFEETKLIVKVPSIYWWYKTSSHAAELTAGYHNPTNQDGYSPVFEVLRKHSVTMKFVCLGFQLSNQEADESLTDPEGLSWQVLNSAWDRGLTVAGENALLCYDREGYKRLVEMAKPRNDPDRRHFSFFVFQQPSLVQGNICLSELDYFIKCMHGELAGDL 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01023 671 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 409 431 IPR001554 GO:0000272|GO:0016161
Bva08g01023 671 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 482 501 IPR001554 GO:0000272|GO:0016161
Bva08g01023 671 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 589 611 IPR001554 GO:0000272|GO:0016161
Bva08g01023 671 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 294 312 IPR001554 GO:0000272|GO:0016161
Bva08g01023 671 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 516 532 IPR001554 GO:0000272|GO:0016161
Bva08g01023 671 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 273 287 IPR001554 GO:0000272|GO:0016161
Bva08g01023 671 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 551 574 IPR001554 GO:0000272|GO:0016161
Bva08g01023 671 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 533 544 IPR001554 GO:0000272|GO:0016161
Bva08g01023 671 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 316 337 IPR001554 GO:0000272|GO:0016161
Bva08g01023 671 PANTHER BETA-AMYLASE 8 73 669 - -
Bva08g01023 671 SUPERFAMILY (Trans)glycosidases 233 666 IPR017853 -
Bva08g01023 671 Pfam Glycosyl hydrolase family 14 258 631 IPR001554 GO:0000272|GO:0016161
Bva08g01023 671 MobiDBLite consensus disorder prediction 1 86 - -
Bva08g01023 671 MobiDBLite consensus disorder prediction 68 86 - -
Bva08g01023 671 PANTHER - 73 669 IPR001554 GO:0000272|GO:0016161
Bva08g01023 671 Pfam BES1/BZR1 plant transcription factor, N-terminal 68 214 IPR008540 -
Bva08g01023 671 Gene3D Glycosidases 229 670 - -
Bva08g01023 671 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01023 Bva-Chr8 5238870 5244274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01023 37 667 Glycoside Hydrolase AT5G45300 66.667 0.0 887
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Bva08g01023 Glyco_hydro_14 1e-87 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01023 K01177 - gmx:100777004 1147.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01023 08 5238870 5244274 Bva08g01023 08 5238870 5244274 ECH