Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01021 ATGGTGGGCACAAGAATAGGCCAATGGCTAAGTCTTCTAGCATGCATAGTGCTGTTACTGAAGGCAGAAGGATATTTCGTGGAAATCACTTATGTCGAAAATGCAGTAGCTAAAGGAGCCGTTTGTTTGGATGGGAGCCCACCAGCTTACCACCTTGATAAGGGATTTGGAGATGGGATTAACAATTGGTTAATTCAGATTGAAGGAGGAGGCTGGTGCAACAATGCCACGTCTTGCCTTTCCCGCAAGAAAACTCGTTTAGGTTCATCTAAGCAAATGGTCAAGCAGCTTGCGTTTCATGGAATTTTGAGTAATGATCCACAGTTTAATCCAGATTTCTACAACTGGAACAGAATCAAGGTTAGGTACTGTGATGGGTCATCGTTTACTGGTGATGTGGAAGAAGTCGATTCAGCCACCAATCTATACTACAGAGGAGCAAGAGTTTTTAATGCCATCATGGAGGAATTACTAGCAAAAGGAATGAAAAATGCTCAAAATGCTATTATTTCTGGTACTTCAGCTGGAGGATTGGCTTCTATATTACATTGTGACCGCTTTCGATCTCTATTGCCTGCTAGTGCTAAAGTGAAATGCCTTTCAGACGGTGGTTATTTTATCAATGTAAAGGATGTTTCTGGAGCACCACACATTGAACAGTTCTACGCTCAAGTTGTGGCAACACATGGTTCAGCAAAGAATTTGCCTGCATCTTGCACTTCAAGACTCAGCCCAGGGATGTGCTTTTTTCCTCAATATGTGGTATCAGAAATCCGTGCACCAATCTTCTTGTTAAATTCACCCTATGACTCATGGCAGATAAGGAACATTTTAGCACCGGCTGTTGCTGATCCCCATGGCCTCTGGCATAGCTGCAAGCTTAATATAAAGAATTGCTCACCTGATCAACTCATTACGATGCAAGGCTTCAGAAATGATTTCTTAAAGGCAATTAGCGTGGTTAGCGACTCTCCATTGGTAGGAATGTTCATAGACTCTTGCTATGTCCACGCCCAAATTGGAAAATGGTTAAGGAATGACTCTCCCTTGCTGGCCAATACAACAATTGCACAGGCAGTAGGAGACTGGTATTATGAAAGAAAACCGTTCAAGCAGATTGATTGTGCTTACCCCTGCAACCCCACTTGTCATAACCGCGTTTATGGACCAAACGACAACCCAGAAGTATA 1190 0.4286 MVGTRIGQWLSLLACIVLLLKAEGYFVEITYVENAVAKGAVCLDGSPPAYHLDKGFGDGINNWLIQIEGGGWCNNATSCLSRKKTRLGSSKQMVKQLAFHGILSNDPQFNPDFYNWNRIKVRYCDGSSFTGDVEEVDSATNLYYRGARVFNAIMEELLAKGMKNAQNAIISGTSAGGLASILHCDRFRSLLPASAKVKCLSDGGYFINVKDVSGAPHIEQFYAQVVATHGSAKNLPASCTSRLSPGMCFFPQYVVSEIRAPIFLLNSPYDSWQIRNILAPAVADPHGLWHSCKLNIKNCSPDQLITMQGFRNDFLKAISVVSDSPLVGMFIDSCYVHAQIGKWLRNDSPLLANTTIAQAVGDWYYERKPFKQIDCAYPCNPTCHNRVYGPNDNPEV 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01021 396 PANTHER PECTIN ACETYLESTERASE 3 391 - -
Bva08g01021 396 PANTHER NOTUM-RELATED 3 391 IPR004963 GO:0016787
Bva08g01021 396 Pfam Pectinacetylesterase 21 369 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01021 Bva-Chr8 5230549 5234309 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01021 5 396 Carbohydrate Esterase AT4G19420 59.302 0.0 544