Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01020 ATGAAACCGTTTGCTCCCATGTTACCTCCAGTTTGGTTCATATGCCTTCAACTGATCCTTCTCTTTTATGTAACCATGCTGTGGTCTCATCCTGGGAAAGCTGTATCTGCATTAGGAAATGAGACTGATTATTTGGCATTGCTTAAGTTTAAAGAATCAATATCCGATGACCCTTTTGAAATCCTGGCCTCTTGGAATAGCTCAACCCACTTCTGCAACTGGCATGGCATCACATGCAACCATCAGCATCAAAGAGTTATTGAGTTAGACCTAAGAAGCTATCACTTGCTTGGATTCATATCACCTTACGTTGGCAACCTCTCCTTTTTGAGAAGTCTCCTCCTTCAGCACAACAGATTGAAAGGAGCAGTCCCACAAGAATTGGATCATTTATCCCAACTACAACAACTCTCTCTCACCAATAACACATTGTCTGGGCAAATTCCaaccaacttaacaagttgcTCAGAACTAAGGCGCTTAAATTTGTCGTGGAATGGTTTTATTGGCAAAATACCATCGGAGATTGGCTTACTTCGGAAGCTTGAAATGTTGACTATCGTTTCAAACAATTTAACAGGAAAAATCCCAGATTCCATAGGGAATCTTTCTTCTCTTACAATTTTTCACGCGGCTTATAATAACTTGGAGGGCAGCATACCAGATGTAAGCCATTTGAGAAACTTGACACGAATAGGAGTACCTGGAAACAAACTTGTTGGCACgcttttttcttcactttacAATATGTCATCTCTTATTCTCATCTCAGCTGCAGAAAATCAGTTCAATGGCTCTCTTCCAGATGACATATTTCTTACCCTCCCTAATCTCCAAACTTTTGCCATTGGTTCAAATCATATGGTAGGTCCAATCCCAAATTCCATCATGAATATATCTGTGCTTCAACAATTTGATATAGGAGGAAACTATTTTGCAGGACAAGTTCCACGTCTAGGAAACCTTCTAGATCTTACGTTTCTGAGTTTATATTCTAATAATCTTGGGTCTGGAAGCTTTGGTTCTGTGTATAAAGCAAGTCTGGAGCCAGAATATGGAGTTGTTGCTATAAAGGTCCTAAACCTTCAAAAGAAGGGAGCTAACTCTACTTTCATTGCTGAATGTAATGCACTCAGAAATATTAGGCATCGAAatcttgttaaaattttgacatgtTGCTCCAGCATAGATTACGAAGGCAATGAATTTAAGGCTCTAATTTTTGAGTACATGGAAAATGGAAGCCTAGAGAAATGGTTGCATCTAGGTACTGAAAGTGCAATCAGCCAAAAACTGAGCCTTGTTCAAAGAGTAAATACTATTATAGATGTTTCTTCTGCATTACATTATCTCCACCATGAATGTGAACAACCTATAATTCATTGTGATTTAAAGCCCGAAAATGTCCTTCTTGATCATGACATGGTTGCTCATGTGGGCGATTTTGGATTAGCAAGGCTTCTCTCAGCAATTAATGGCATCCCTTATATGCAAACCAGCTCAATTGGAATTAAGGGGACCCTTGGCTATGCTCCTCCAGagtaTGGCATGAATTCTGATGTGTCAACACAAGGAGATGTCTACAGCTACGGAATTCTTGTGCTGGAGATGTTAACTGGAAGAAGACCCACGGATGATATGTTCAAAGATGGTGAAAATCTTCATAGCCATGTTAAAACTGCATATCCAGATAACCTTCTGCAGATTGTGGATCCAACTATTTTCCATGAAGAATTACAACAGACAGCAACATCAGCAGAAGGAGACAAGGAGAACCTGTTTCTTATGCCTCCTGATGTCGAGAAGATCTTTGTTTCACTTTTTAGGATTGGGCTTGGTTGTTCAGTGGAAtcaccaaaagaaagaatgagtaTGGTGAATGTCATCAAAGAGCTGAATCTTATTAGAAATGTCATTCCTGCTGGTGCACGGAGACTGAGAATGCAGAGGTTGTTGGAATA 1961 0.383 MKPFAPMLPPVWFICLQLILLFYVTMLWSHPGKAVSALGNETDYLALLKFKESISDDPFEILASWNSSTHFCNWHGITCNHQHQRVIELDLRSYHLLGFISPYVGNLSFLRSLLLQHNRLKGAVPQELDHLSQLQQLSLTNNTLSGQIPTNLTSCSELRRLNLSWNGFIGKIPSEIGLLRKLEMLTIVSNNLTGKIPDSIGNLSSLTIFHAAYNNLEGSIPDVSHLRNLTRIGVPGNKLVGTLFSSLYNMSSLILISAAENQFNGSLPDDIFLTLPNLQTFAIGSNHMVGPIPNSIMNISVLQQFDIGGNYFAGQVPRLGNLLDLTFLSLYSNNLGSGSFGSVYKASLEPEYGVVAIKVLNLQKKGANSTFIAECNALRNIRHRNLVKILTCCSSIDYEGNEFKALIFEYMENGSLEKWLHLGTESAISQKLSLVQRVNTIIDVSSALHYLHHECEQPIIHCDLKPENVLLDHDMVAHVGDFGLARLLSAINGIPYMQTSSIGIKGTLGYAPPEYGMNSDVSTQGDVYSYGILVLEMLTGRRPTDDMFKDGENLHSHVKTAYPDNLLQIVDPTIFHEELQQTATSAEGDKENLFLMPPDVEKIFVSLFRIGLGCSVESPKERMSMVNVIKELNLIRNVIPAGARRLRMQRLLE 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01020 653 Gene3D Ribonuclease Inhibitor 40 319 IPR032675 -
Bva08g01020 653 Gene3D Phosphorylase Kinase; domain 1 330 414 - -
Bva08g01020 653 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Bva08g01020 653 SUPERFAMILY Protein kinase-like (PK-like) 332 633 IPR011009 -
Bva08g01020 653 Pfam Protein kinase domain 333 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01020 653 Pfam Leucine rich repeat 110 167 IPR001611 GO:0005515
Bva08g01020 653 SUPERFAMILY L domain-like 40 335 - -
Bva08g01020 653 ProSitePatterns Protein kinases ATP-binding region signature. 335 358 IPR017441 GO:0005524
Bva08g01020 653 PANTHER OS04G0122200 PROTEIN 28 339 - -
Bva08g01020 653 PANTHER OS04G0122200 PROTEIN 335 647 - -
Bva08g01020 653 ProSiteProfiles Protein kinase domain profile. 329 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01020 653 Gene3D Transferase(Phosphotransferase) domain 1 415 642 - -
Bva08g01020 653 PANTHER LRR RECEPTOR-LIKE KINASE 28 339 - -
Bva08g01020 653 PANTHER LRR RECEPTOR-LIKE KINASE 335 647 - -
Bva08g01020 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Bva08g01020 653 SMART serkin_6 329 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01020 Bva-Chr8 5225456 5229594 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01020 88 647 Receptor kinase-like Gene Family AT3G47090 37.418 1.08e-118 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva08g01020 Pkinase 7.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01020 - - qsu:112017241 652.899