Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01000 ATGCCACAACAGAACTGCATAGCATCAAAACCAGAACACTGCAGTATTAGTCACACAATGGAAGGACCACCACAGATGACAGAGCCTCATAACTCTACTGTCGTTGCCTACCCCATAAGAAGCAATGAACAACAGTCTTTTCCAACACTCGCTCTCTACCCCATAACTTTGAAGTTTGAGGAATTGGTGTACAAAGTTAAACTAGAGCAGAAAGCACTATGCTGGGGAAGCACATGGACTAGCAAAGAGAAAACCATATTGAATGGGATTTCAGGTATGGTTTGCCCAGGAGAAATACTGGCTATGCTGGGCCCTTCTGGCAGTGGCAAAACGACACTTCTTACTGCTCTTGGTGGCCGTTTGAATGGTAAATTATCTGGGAAAATCACATACAACAATCAACCATTCTCTGGTTCCATAAAAAGAAGAACAGGGTTTGTGGCCCAAGACGATGTTCTCTACCCTCATCTCACTGTTTCTGAAACACTGATATTCACTGCACTTCTAAGGCTTCCCAATAGTTTGACAAGGGATGAGAAAGTTCAACACGTAGAGAGAGTGATCACTGAGCTTGGACTGACTCGGTGCAGGAACAGCATGATAGGTGGACCACTTTTCCGAGGCATATCAGgtggagagaaaaagagagtgaGCATAGGCCAAGAAATGCTCATTAATCCAAGCCTTTTGCTGCTAGATGAGCCCACTTCGGGCTTGGACTCTACCACAGCTCAGAGGATTCTAAACACGATCAAAAAGCTTGCTAATGGGGGTAGAACTGTAATCACCACCATCCATCAACCCTCTAGCCGCCTTTACCATATGTTTGATAAGGTGGTTTTGCTCTCTGAAGGTTGCCCCATCTATAATGGCCCTGCTTCAACAGCTTTGAACTATTTTTCATCCATTGGTTTTTCCACATCCATGACTGTCAATCCTGCTGACCTCTTGCTAGATCTTGCCAATGGGTTGGCCCCGGACTCCAAGAATGCAGCTGAACAAAGTGAGGGCCTGGAACAAGACAGGAAGCAGGTGAGAGAAAATCTCATCTCTGCTTATGAGAAGAACATAGCTTCAAGGTTGAAAACTGAGCTTTGCAGCTTGGAGATGAACAGCTACAATGCCCCAAAAGATGCTACTGCAAGAAATGGCGTAAAGGCAGAGCGATGGAGCACAAGCTGGTGGCATCAGTTCAAGGTACTGTTACAGAGGGGGTTGAGGGAGAGAAGGCATGAAGCATTCAACAGGCTTAGAATATTCCAAGTCATAAGCGTGGCTTTTCTTGGTGGACTCTTGTGGTGGCATACTCCAGAATCACACATTGGTGATAGGATTGccttgctatttttcttctctgttttctGGGGATTCTACCCTCTCTACAATGCAGTCTTCACATTTCCGCAAGAAAGAAGAATGCTGATAAAGGAACGGTCATCGGGAATGTATCGCCTTTCTTCGTACTTTATGGCTAGAACTATAGGAGACATGCCACTGGAACTCGCTCTTCCAACTGCATTTGTCTTCATAATCTATTGGATGGGAGGGCTTAAACCAGATCCAATGACTTTCATCCTTTCCCTCATTGTGGTTCTTTACAGTGTTCTTGTGTCTCAAAGTCTTGGCTTAGCATTTGGTGCTATTTTGATGGAGATTAAACAGGCCACCACTTTAGCTTCTGTGACAACTCTTGTGTTTCTCATTGCTGGAGGATACTATGTACAGCAAATTCCTCCATTCATAGAGTGGCTCAAGTACTTAAGCTACAGCTATTACTGTTACAAGCTCCTTCTTGGTGTTCAGTACAATGAAGATGACTATTATGAGTGCTCAAATGGGGTGCCGTGCAGAGTTGCTGATTTTCCTGCAGTTAAATCAATGGGCTTGAATAACTTGTGGGTTGATGTGTGCATCATGGCTATGATGCTGGTGGGTTATCGACTAGTTGCTTATTTAGCACTGCATAGAGTGAGATA 1976 0.4352 MPQQNCIASKPEHCSISHTMEGPPQMTEPHNSTVVAYPIRSNEQQSFPTLALYPITLKFEELVYKVKLEQKALCWGSTWTSKEKTILNGISGMVCPGEILAMLGPSGSGKTTLLTALGGRLNGKLSGKITYNNQPFSGSIKRRTGFVAQDDVLYPHLTVSETLIFTALLRLPNSLTRDEKVQHVERVITELGLTRCRNSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKKLANGGRTVITTIHQPSSRLYHMFDKVVLLSEGCPIYNGPASTALNYFSSIGFSTSMTVNPADLLLDLANGLAPDSKNAAEQSEGLEQDRKQVRENLISAYEKNIASRLKTELCSLEMNSYNAPKDATARNGVKAERWSTSWWHQFKVLLQRGLRERRHEAFNRLRIFQVISVAFLGGLLWWHTPESHIGDRIALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFMARTIGDMPLELALPTAFVFIIYWMGGLKPDPMTFILSLIVVLYSVLVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYVQQIPPFIEWLKYLSYSYYCYKLLLGVQYNEDDYYECSNGVPCRVADFPAVKSMGLNNLWVDVCIMAMMLVGYRLVAYLALHRVR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01000 658 Pfam ABC-2 type transporter 266 333 IPR043926 GO:0140359
Bva08g01000 658 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 57 309 IPR003439 GO:0005524
Bva08g01000 658 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 39 656 - -
Bva08g01000 658 CDD ABCG_EPDR 54 291 - -
Bva08g01000 658 Pfam ABC-2 type transporter 397 602 IPR013525 GO:0016020|GO:0140359
Bva08g01000 658 Gene3D - 76 303 IPR027417 -
Bva08g01000 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 304 IPR027417 -
Bva08g01000 658 SMART AAA_5 96 286 IPR003593 -
Bva08g01000 658 Pfam ABC transporter 87 237 IPR003439 GO:0005524
Bva08g01000 658 Coils Coil 328 348 - -
Bva08g01000 658 ProSitePatterns ABC transporters family signature. 209 223 IPR017871 GO:0005524
Bva08g01000 658 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 39 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01000 Bva-Chr8 5107810 5110803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01000 86 285 Calmodulin-binding Proteins AT2G36910 29.384 1.65e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01000 K05681 - gmx:100780191 1142.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01000 08 5107810 5110803 Bva08g01000 08 5107810 5110803 ECH