Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00992 ATGACCGTTGATATGCCACCATCCATGGCCCAAAATGTGAGGCCAAGCAGGTCTTCCTTTAGCTCTGGTAATGGCCACGAGGAAACTCCTCTACACAATTATGCTACTGTTAGTAACGGTGATGACTATGACAGTGATGGCTCCAATTTTGCACCATCcacACCAAACTCTCTGTCAAAGGCTATCCCAGCAGAATTGGCCGGTGCTATACCCTTGATTGATAGATTCCAGGTAGAAGGATTTCTAAAATTGATGCAGAAGCAAATTCAATCTGCTGGGAAGCGtggatttttttctaaaagatcTGTAGGCCCTCAAATTCgagaaaaatttacatttgagGACATGCTTTGTTTTCAGAAGGACCCGATACCAACTTCATTGCTAAAGATTAATGGTGATCTGGTAAGCCGGGCAACAAAACTATTTcagataattttgaaatatataggAGCTGATTCATCTGATCGTGTAACTCCAATAAGCTTAGATGAGCGAGTTGAGCTTGTAGGAAAACTATACAAGCAAAGTTTGAAACGTTCTGAGCTTCGAGATGAACTTTTTGTTCAGACATCAAAACAAACTAGAAATAACCCTGAGAGACAATATTTGATTAAAGCATGGGAGCTAATGTATCTATGTGCATCATCTATGCCTCCTAGTAAGGACATTGGTGGATACCTGTCAGAATATGTTCATAATGTAGCACATGGTGTGACTACTGATTCTGAGATCCGAGCCCTTGCATTAAACACACTAAATGCTTTAAAGCGCTCTGTCAAGGCTGGTCCAAGGCATACAATACCAGGTCGCGAGGAGATTGAAGCTTTGTTAACAGGGAGAAAGCTTACAACTATAGTGTTCTTTCTAGATGaaacttttgaagaaattacaTACGACATGGCAACAACAGTTGCTGATGCTGTTGAGGAACTTGCAGGGATCATTAAGCTGTCAACTTACTCTAGCTTTAGTCTCTTTGAATGCCGGAAAGTTGTTACTGGCTCCAAATCACCTGATCCTGGGAATGAAGAACACATTGGGTTAGAtgataacaaatatattggTGATCTCCTAGCAGAATTTAAGGCAGCAAAAGATCGAAGTAAAGGAGAAATCTTGCACTGTAAACTGATACTCAAGAAAAAGCTATTTCGTGAGTCAGATGAATCTGTGGCAGGTCCAATGTTTGTGCAGTTGTCCTATGTACAATTACAACATGATTATATTTTGGGTAATTATCCTGTTGGAAGGGACGATGCTGCACAACTATCTGCATTGCAAATCTTTGCTGAGATTGGATTTGTTAAATCACCTGAATCATGCACTGACTGGAACTCACTTCTGGAGCGGTTCTTGCCTAGACAAATTGCAATCACACGAGCAAAACGGGAATGGGAGTTGGACATTCTTTCTCGTTATCATTCATTGGAACATATGACAAAAGATGACGCAAGACAGCAATTTCTGCGGATATTGAGAGCACTTCCATATGGGAATTCTGTATTCTTCAATATTCGCAAGATTGATGATCCTATTGGGCTTTTACCTGGAAGAATAATATTGGGCATTAACAAGAGAGGGGTTCATTTTTTCCGTCCAGTTCCAAAGGAATATTTGCATTCAGCTGAGTTAAGAGACATAATGCAATTTGGTAGTAGCAATACTGCAGTATTTTTCAAGATGAGAGTTGCAGGTGTTCTTCACATATTCCAATTTGAAACCAAGCAGGGAGAAGAAATTTGTGTAGCTCTTCAGACACATATAAATGATGTAATGTTGCGCCGATATTCTAAAGCCCGAACTGCTGCTGGTGGTTCTGTGAATGGAGATATTTCTAACAATCCTAAGCCTCCTAATTTAGAATTGTATGAGAGGCAGCTTCAGGATTTATCAAAAGCTGTTGAAGATTCTCAAAGAAATGCTGATCAATTGGTAGAAGAATTGCGTGACAAGCAAAAATTAGAGGAGAAAATACAAGAAGAATTGGAGGCCCTCAAAGAATCCTTAGAAGCTAATAAGCAAAATCTTGAAGAAGTTTCAAGTGATCGTGATAGGCTTAAATCATTATGcaatgaaaaagataaagcaTTTCAGGCTGTGATTCTAGATAAAAGGAATATGGAAGCAAGGTTGgcaaaattgaataatatgaTGGTGGAGAACAATACTAAAACGGATCCTGTTGGAGCAAATAATCAAGTACAAAAGCTTGAAGATGAGCTAAAACTTTGTAAAGAAGAGCTGCAAGTTGCTGAAGAAACTATCAAAAgactaataaatgaaaaattggtTTTGGAACAGAAGAGATCAGAactagagaagaagaagaaagctgaCGAGATTAGTGTTCTTGAACGGAAATTTGAGCAAGAACGCAAAGCCACAAGGTCTCAAGTGTATGACCTTGAAAAGAAACTTGAAGGGGTTAGACAAGAATTAGCTATTGCTGAGTCAACTCTTTCGGCCAAGGATTCTGAGATGGATCCTTTGCGGAATAATTTAAAGGAATTGGAAGaattaagagaaatgaaagagGACATTGACAGAAAGAATGAGCAAACATCTGCCATATTAAAGATGCAAGGTGCTCAAATAGCTGAATTGGAAGTCCTCTATAAAGAAGAACAAGTTCTAAGGAAGCGCTATTTTAATACAATAGAAGaTATGAAGGGCAAGATTAGAGTTTATTGTCGGCTAAGACCACTTAGTGAGAAAGAAATCATTGAGAAAGAACGAAATGTTGTGACAAGTATAGACGAGTTTACTGTTGAACATATGTGGAGAGATGATAAGCAAAAGCAGCACATCTATGATCGAGTATTTAATGGTGATGCTACCCAAGAAGAAGTATTTGAGGATACGAGGTATTTGGTGCAATCTTCTGTAGATGGTTATAATGTGTGCATATTTGCCTATGGTCAAACTGGTTCCGGAAAGACATTTACTATCTATGGATCTGAAAATAATCCAGGGCTTACACCACGTGCTACTGCAGAgctgtttgaaattttaaggaGAGATCgtaacaaattttctttttctttaaagGCATACATGGTAGAACTTTATCAAGATACCCTTGTTGACCTTCTTTTGCCAAAGAATGCAAAGCGTCTAAAATTGGATATTAAGAAGGATTCAAAGGGCATGGTAGTTGTGGAGAACGTAACAGTTGTGTCAATTTCTACTATGGAGGAATTGAACAGCATAATACAAAGAGGATCTGAACAACGACATACATCAGGAACACAGATGAATGAAGAAAGTTCAAGATCTCATCTTATACTTTCAATTGTAATTGCAAGTACCAACCTTCAAAGTCAATCAGTTGCAAGAGGAAAGCTAAGTTTTGTGGATCTTGCTGGGTCTGAAAGAGTAAAAAAGTCTGGCTCCACTGGTAGTCAACTTAAAGAAGCTCAAAGTATCAATAAATCATTATCAGCACTCGGAGATGTTATCAGTGCTTTGTCTACCGCTGGTCAACACACACCTTATAGGAATCACAAGTTAACTATGCTAATGAGTGATTCGCTTGGCGGTAATGCCAAAACTCTCATGTTTGTGAATGTATCTCCAGCAGAGTCAAACTTGGACGAGACTTACAATTCTCTTATGTATGCATCACGAGTGCGATCCATTGTGAATGATCCAAGCAAAAACGTTTCATCAAAAGAGATAGCTCGATTGAAGAAGTTGGTTGCATATTGGAAGGAGCAAGCAGGTAGAAGGGGAGAGGATGAAGATTtacaagaaattcaagaagAGCGGCCAACTAGAGAGAGAGGGGCTATTTA 3797 0.3682 MTVDMPPSMAQNVRPSRSSFSSGNGHEETPLHNYATVSNGDDYDSDGSNFAPSTPNSLSKAIPAELAGAIPLIDRFQVEGFLKLMQKQIQSAGKRGFFSKRSVGPQIREKFTFEDMLCFQKDPIPTSLLKINGDLVSRATKLFQIILKYIGADSSDRVTPISLDERVELVGKLYKQSLKRSELRDELFVQTSKQTRNNPERQYLIKAWELMYLCASSMPPSKDIGGYLSEYVHNVAHGVTTDSEIRALALNTLNALKRSVKAGPRHTIPGREEIEALLTGRKLTTIVFFLDETFEEITYDMATTVADAVEELAGIIKLSTYSSFSLFECRKVVTGSKSPDPGNEEHIGLDDNKYIGDLLAEFKAAKDRSKGEILHCKLILKKKLFRESDESVAGPMFVQLSYVQLQHDYILGNYPVGRDDAAQLSALQIFAEIGFVKSPESCTDWNSLLERFLPRQIAITRAKREWELDILSRYHSLEHMTKDDARQQFLRILRALPYGNSVFFNIRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARTAAGGSVNGDISNNPKPPNLELYERQLQDLSKAVEDSQRNADQLVEELRDKQKLEEKIQEELEALKESLEANKQNLEEVSSDRDRLKSLCNEKDKAFQAVILDKRNMEARLAKLNNMMVENNTKTDPVGANNQVQKLEDELKLCKEELQVAEETIKRLINEKLVLEQKRSELEKKKKADEISVLERKFEQERKATRSQVYDLEKKLEGVRQELAIAESTLSAKDSEMDPLRNNLKELEELREMKEDIDRKNEQTSAILKMQGAQIAELEVLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLSEKEIIEKERNVVTSIDEFTVEHMWRDDKQKQHIYDRVFNGDATQEEVFEDTRYLVQSSVDGYNVCIFAYGQTGSGKTFTIYGSENNPGLTPRATAELFEILRRDRNKFSFSLKAYMVELYQDTLVDLLLPKNAKRLKLDIKKDSKGMVVVENVTVVSISTMEELNSIIQRGSEQRHTSGTQMNEESSRSHLILSIVIASTNLQSQSVARGKLSFVDLAGSERVKKSGSTGSQLKEAQSINKSLSALGDVISALSTAGQHTPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETYNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKEQAGRRGEDEDLQEIQEERPTRERGAI 1265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00992 1265 Pfam MyTH4 domain 172 276 IPR000857 GO:0005856
Bva08g00992 1265 SUPERFAMILY Second domain of FERM 381 498 IPR035963 -
Bva08g00992 1265 Gene3D Kinesin motor domain 880 1216 IPR036961 -
Bva08g00992 1265 Coils Coil 705 725 - -
Bva08g00992 1265 ProSiteProfiles Kinesin motor domain profile. 893 1214 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00992 1265 CDD FERM_C_KCBP 500 606 - -
Bva08g00992 1265 PANTHER KINESIN-RELATED 614 1263 IPR027640 GO:0003777|GO:0007018
Bva08g00992 1265 SUPERFAMILY PH domain-like 503 591 - -
Bva08g00992 1265 Coils Coil 735 858 - -
Bva08g00992 1265 MobiDBLite consensus disorder prediction 1 56 - -
Bva08g00992 1265 Gene3D - 1217 1264 - -
Bva08g00992 1265 SMART kinesin_4 891 1222 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00992 1265 ProSitePatterns Kinesin motor domain signature. 1114 1125 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bva08g00992 1265 Pfam Kinesin motor domain 899 1214 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00992 1265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 893 1242 IPR027417 -
Bva08g00992 1265 SUPERFAMILY Prismane protein-like 836 897 IPR011254 GO:0003824|GO:0016491
Bva08g00992 1265 MobiDBLite consensus disorder prediction 1241 1265 - -
Bva08g00992 1265 Gene3D - 282 386 - -
Bva08g00992 1265 Coils Coil 621 690 - -
Bva08g00992 1265 SMART B41_5 279 503 IPR019749 -
Bva08g00992 1265 Gene3D MyTH4 domain 98 280 IPR038185 -
Bva08g00992 1265 CDD FERM_B-lobe 398 496 IPR019748 -
Bva08g00992 1265 CDD KISc_C_terminal 891 1216 - -
Bva08g00992 1265 Gene3D - 395 496 IPR014352 -
Bva08g00992 1265 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 614 1263 - -
Bva08g00992 1265 ProSiteProfiles MyTH4 domain profile. 119 278 IPR000857 GO:0005856
Bva08g00992 1265 Gene3D - 501 608 IPR011993 -
Bva08g00992 1265 PRINTS Kinesin heavy chain signature 1084 1101 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00992 1265 PRINTS Kinesin heavy chain signature 1115 1133 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00992 1265 PRINTS Kinesin heavy chain signature 965 986 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00992 1265 PRINTS Kinesin heavy chain signature 1164 1185 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00992 1265 ProSiteProfiles FERM domain profile. 283 597 IPR000299 GO:0005856
Bva08g00992 1265 SMART MyTH4_1 119 278 IPR000857 GO:0005856
Bva08g00992 1265 Pfam FERM central domain 391 503 IPR019748 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00992 Bva-Chr8 5054746 5062889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00992 34 1261 Calmodulin-binding Proteins AT5G65930 74.576 0.0 1884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00992 - - adu:107475586 2050.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00992 08 5054746 5062889 Bva08g00992 08 5054746 5062889 ECH