Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00977 ATGGGCTCCGTTGAGGGAAGAATTTGTGAGGAATTAACGCCTAGGTACTACGGGCTTTGCGCCATTGGAGGGATGCTCAGTGCTGGCACTACCCATGTTGCGATCACTCCCCTCGATGTCTTAAAAGTCAATATGCAGGTGTTCCCAATAAAGTACAACACCATCTCATCCTGTTTTACTACCTTATTGAGAGAACAAGGACCTTCTGCCTTGTGGAGAGGTTGGGCAGGCAAGTTCTTTGGATATGGTGCTCAAGGAGGGTGCAGATTTGGTCtctatgaatattttaaggGTCTATATTCCCAAACATTGGCGGATCAGAACAGGagtttgattttcttcatGAGTAGTGCTTCTGCTGAAGTATTTGCGAATATAGCTCTCTGCCCGTTTGAAGCTATTAAAGTGAGGGTCCAAGCACAACCCCAATTTGCTAAGGGTTTATTTGATGGCGTTCCAAAGTTGTATGCATCAGAAGGCATGCAAGGATTCTACCGTGGGCTTATTCCACTTTGGGGTCGAAACCTTCCATTTTCCATGGTAATGTTCTCAACGTTTGAGCATTCTGTTAGTTTCCTGTATTGTAATGttgttaaaagaagaaaggaggaTTGCTCGAAAGCTCAACAACTTGGTGTGACATGTTTAGCTGGATATGCAGCTGGATCTGTTGGTAGCTTCATTTCTAATCCTGCTGACAATATCGTGGCTTCTCTTTATAACAGAAAGGCTGATAATCTCATGATGGCTATTAGAAAAATTGGGCTAGTCAATCTATTTACGAGGAGCCTTCCAATTAGAATAATGCTGGTTGGCCCTTCTATAACTTTGCAATGGTTATTCTACGACACCATTAAAGTTTTAGCTGGACTGCCAACTAGTGGTGAAGTTGCGACTGACTTGGGAGAAGGCAAGGGCAGCTA 923 0.4171 MGSVEGRICEELTPRYYGLCAIGGMLSAGTTHVAITPLDVLKVNMQVFPIKYNTISSCFTTLLREQGPSALWRGWAGKFFGYGAQGGCRFGLYEYFKGLYSQTLADQNRSLIFFMSSASAEVFANIALCPFEAIKVRVQAQPQFAKGLFDGVPKLYASEGMQGFYRGLIPLWGRNLPFSMVMFSTFEHSVSFLYCNVVKRRKEDCSKAQQLGVTCLAGYAAGSVGSFISNPADNIVASLYNRKADNLMMAIRKIGLVNLFTRSLPIRIMLVGPSITLQWLFYDTIKVLAGLPTSGEVATDLGEGKGS 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00977 307 PANTHER PHOSPHATE CARRIER PROTEIN 5 301 - -
Bva08g00977 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 288 IPR018108 -
Bva08g00977 307 Pfam Mitochondrial carrier protein 114 194 IPR018108 -
Bva08g00977 307 Pfam Mitochondrial carrier protein 21 101 IPR018108 -
Bva08g00977 307 Gene3D Mitochondrial carrier domain 19 290 IPR023395 -
Bva08g00977 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 192 IPR018108 -
Bva08g00977 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 99 IPR018108 -
Bva08g00977 307 SUPERFAMILY Mitochondrial carrier 19 284 IPR023395 -
Bva08g00977 307 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 5 301 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00977 Bva-Chr8 4965768 4968579 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00977 1 307 Chloroplast and Mitochondria Gene Families AT2G17270 67.857 2.98e-160 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00977 K15102 - gmx:100788561 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00977 08 4965768 4968579 Bva08g00977 08 4965768 4968579 ECH