Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00968 ATGAAATACCGGTTTCTTAGGGTTTCAAGCGCTTTGATATTGCTAATCGCGCTTTTTTCGAGCTTAAATGGTGATGTATCCAAGTCAGGGAACTCCCAAGTCTCGCGTCCGATTCTGGATTCTCATGGGAATGACTACAAGGGCTTATCTCTGCCTCCTTCAAGCCGAAATCCTCTGCCTCTGCCTCTGCCATCTAAGCGTGAGACCGCACTCATTGCTGCTGGAGATGGGACAATATATTTGGTGGAGAGTAGTTCCATGAGAGTAATATGGTCATTTGAAACAGGATCACCCATTTACAGTTCATATCAAGCTCCTCTCAACAAGgataatgataaagaaaatgtttctgAAAGAAGTTCTGAGTTTTTGGAATGTGGAGATGACTGGGGATTATATGTTCAAACCAAGCACTTTGGTAAAATGAGACTCTCAACATCAGTTGCAGATTTTGTACAAGCGACACCTACCATATCAGATGATGGAGCAGTCACACTTGGATCCAAAAGGATCACTGTATTTGACATTGATGCTAAGACTGGAAGGATCATTCGAAGCTTTGCTATATCAGATTTTGATAATTCTTCTGCGTGGTGGAATGGTGAAAAGCAGAATGTTATGGATATTCCTAGTACAAAGAAGCAGGAGCTGGTGAAGGCTGATGCTGTGGTGCTAAATACGCCAGAGTTGCTGCTGAAAATATTTAGGACGGATTATTCTCTGCAATCTGTTGGTCCAACATCAGAAAAGGTTCTATGGAGCATGACAGTAGCTGAATTTGAGGCTATATTTTATTGCCAGCAGAATGATCTGTCTGGTCCTTCTTTCAATTCAGAGGATAAGCATGCTGCTGATATTGGCTTGGATTTTGCTATGCCATATCCATgtttagagaaaaaagaagtctTTCGTCTGCATAAGAATTTCCTATTAGAATCTTCTATCCCTGAAATATTATCTGGGGCTTATCATGGAAAGGAAATACTCCCAATGCCTCCTTCAAATCCAATGCTTCCTTTACAGCCCAATACTGTTAGGTTTTTAAATGGCCATGATGAAAATATGATGCTTCCTTGGCCTGTGGCTGTCCCTGTGCCAAACTCTTTGCCTCCGCTGCAAGCAAATATGAGATTCTATGACAATAATGATAATGCAGCTGCGCTCCCTCTGCCTTCAGGGGAGATAAGTGTATCAGGGGAAGTTGATGTAAATAGGGTGATAGAATGGTCGACAGCATTACCTCTTACATTGTTTATGGCCTTTCTCCTGGGTTTGTCAATATCTTATTATTCTCTGGTGGTTAAAGAGAGAATTATATTCAAGGGCCAAAAGAgtcaatttgatttaaaaagtGGATCTCctaagaaaaagagaacacGTAAGTCTGCAAAGAACAGTGGCACTGTTGATAATAAGGAAAAACATCTGCCATCTGAAGATGAGGATGTACTGACACATGGTGAAACTGATTGGGAAGCACGGTTGCAATTTAATAAAGTTGATGAAGGTGCTGATGGACGTAGGATTGGTAAACTGTTAgtatcaaataaagaaattgctAAGGGAAGCAATGGCACGATTGTCCTGGAGGGAATCTATGAAAGCCGAAATGTTGCTGTCAAACGTCTTGTACAGACTCATCATGATGTAGCCtacaaagaaattcaaaatctcaTTGCATCTGACCGTCATCCAAACATTGTCCGGTGGTATGGGGTAGAATATGATCAAGATTTTGTCTACCTGGCACTGGAGCGTTGTACTTGCAGCTTAGATGATTTGATCCAGTTTTACTCTGATATATCTGAAAACTCAGTGTTTAGCAAGGACCAAACTTCAAGTTGTATGTTAAAGGTACAGATGGAGATGGGGACAGATAATATGCAAAATCTTTGGAAAGCAAATGGCAATCCGTCACCTCTATTATTGAAGCTGATGAGGGATGTGGTTTCTGGGCTTGTTCACTTGCATGAATTGGGAATAATACATCGGGATTTGAAACCCcaaaatgttttaataatcAAGGAGAGATCTTTATGTGCGAAGCTTTCTGATATGGGCATCAGCAAACGCCTTCTTGGAGATATGTCCTCTTTGGATCATAATGCCACTGGCTGTGGTAGTTCAGGTTGGCAAGCGCCAGAACAACTTACTCTTGGACGCCAAACACGGTCTGTTGATTTGTTTAGTTTAGGTTGTGTCCTCTTTTTCTGCATGACGGGGGGAAGACATCCATTTGGAGAACGTCTAGAACGTGATGTCAACATTGTGAAAAATCAAATGGACCTTTTCTTAGTGGATTTCCTTCCTGAAGCTGAGGATCTTATTTCTCGTTTATTAGATCCTGACCCTGACTTAAGgcCGAAGGCATCTGAAGTATTGCAACATCCTTTCTTCTGGAGTTCTGAGAAGAGACTTTCATTCCTTCGCGATGCCAGTGACAGGGTGGAACTAGAAGATAGGGAGGCAACTTCTGATATTCTGGAGGCACTAGAAAATATTGCCCCAGTAGCTTTAGGTACAAAATGGGATGAAAAGCTGGAAGAAGCCTTCATTACTAACATTGGCCGTTACAGAAGATACAAGTTTGACAGTGTCCGAGACTTGTTGCGAGTCATGAGAAACAAACTGAATCATTATAGAGAATTGCCTCAAGAAATTCAGGAGCTTGTAGGGCCTGTACCGGAAGGATTCAATGACTACTTTTCTAGTCGATTCCCCAGACTTTTGATGgaagttttcaaaattatatgcaaATATTGCAAGAAGGAGGAATGTtttcaaagatattttaatgaCGTTGACTA 2807 0.3937 MKYRFLRVSSALILLIALFSSLNGDVSKSGNSQVSRPILDSHGNDYKGLSLPPSSRNPLPLPLPSKRETALIAAGDGTIYLVESSSMRVIWSFETGSPIYSSYQAPLNKDNDKENVSERSSEFLECGDDWGLYVQTKHFGKMRLSTSVADFVQATPTISDDGAVTLGSKRITVFDIDAKTGRIIRSFAISDFDNSSAWWNGEKQNVMDIPSTKKQELVKADAVVLNTPELLLKIFRTDYSLQSVGPTSEKVLWSMTVAEFEAIFYCQQNDLSGPSFNSEDKHAADIGLDFAMPYPCLEKKEVFRLHKNFLLESSIPEILSGAYHGKEILPMPPSNPMLPLQPNTVRFLNGHDENMMLPWPVAVPVPNSLPPLQANMRFYDNNDNAAALPLPSGEISVSGEVDVNRVIEWSTALPLTLFMAFLLGLSISYYSLVVKERIIFKGQKSQFDLKSGSPKKKRTRKSAKNSGTVDNKEKHLPSEDEDVLTHGETDWEARLQFNKVDEGADGRRIGKLLVSNKEIAKGSNGTIVLEGIYESRNVAVKRLVQTHHDVAYKEIQNLIASDRHPNIVRWYGVEYDQDFVYLALERCTCSLDDLIQFYSDISENSVFSKDQTSSCMLKVQMEMGTDNMQNLWKANGNPSPLLLKLMRDVVSGLVHLHELGIIHRDLKPQNVLIIKERSLCAKLSDMGISKRLLGDMSSLDHNATGCGSSGWQAPEQLTLGRQTRSVDLFSLGCVLFFCMTGGRHPFGERLERDVNIVKNQMDLFLVDFLPEAEDLISRLLDPDPDLRPKASEVLQHPFFWSSEKRLSFLRDASDRVELEDREATSDILEALENIAPVALGTKWDEKLEEAFITNIGRYRRYKFDSVRDLLRVMRNKLNHYRELPQEIQELVGPVPEGFNDYFSSRFPRLLMEVFKIICKYCKKEECFQRYFNDVD 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00968 935 Gene3D Phosphorylase Kinase; domain 1 499 585 - -
Bva08g00968 935 MobiDBLite consensus disorder prediction 463 483 - -
Bva08g00968 935 ProSiteProfiles Protein kinase domain profile. 513 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00968 935 SMART serkin_6 513 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00968 935 Gene3D KEN domain 806 935 IPR038357 -
Bva08g00968 935 MobiDBLite consensus disorder prediction 448 483 - -
Bva08g00968 935 Pfam Protein kinase domain 516 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00968 935 ProSiteProfiles KEN domain profile. 802 933 IPR010513 GO:0004540|GO:0006397
Bva08g00968 935 CDD RNase_Ire1 803 931 - -
Bva08g00968 935 SMART PGNneu 864 918 - -
Bva08g00968 935 SUPERFAMILY Protein kinase-like (PK-like) 516 820 IPR011009 -
Bva08g00968 935 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 70 198 IPR011047 -
Bva08g00968 935 Gene3D Transferase(Phosphotransferase) domain 1 593 805 - -
Bva08g00968 935 PANTHER IRE1-RELATED 38 931 IPR045133 GO:0004521|GO:0004674|GO:0030968
Bva08g00968 935 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 38 931 - -
Bva08g00968 935 Pfam Ribonuclease 2-5A 805 931 IPR010513 GO:0004540|GO:0006397
Bva08g00968 935 Gene3D - 61 275 IPR015943 GO:0005515
Bva08g00968 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00968 Bva-Chr8 4914834 4919736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00968 539 798 MAP Kinase Kinase Kinase AT3G06030 27.652 1.68e-21 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Bva08g00968 Pkinase 4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00968 K08852 - gmx:100788389 1104.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00968 08 4914834 4919736 Bva11g01444 11 14074251 14080211 BWGD
Bva08g00968 08 4914834 4919736 Bva08g00968 08 4914834 4919736 ECH
Bva08g00968 08 4914834 4919736 Bva11g01444 11 14074251 14080211 ECH