Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00967 ATGATGGGGGTTTGGTTTGTGGTATTCATGGTTCTCTCCAATGGGTTCTCTCCAACTTGGGCTGACATGAATAATTCCACTGTACCTGATTCTGTAAATATTGGGGTTCTCTACTCTTTCAATGCTACTattggtaaaattttaaaaatcgcTATAGAAGCTGCAGTTGAAGATGTAAATTCTGATTCATCAGTTCTTGGTAAAACTCAGCTGAAAGTCTTAATGCAAGAGGATTCCAAGTACAAAGGTTTTCTGAGCATTGTTGAAACCTTGCAGCTTATGGCCAAACAAACAGTCGCTGTAATTGGCCCTCAATCCTCTATAACAGCTCATGTCATATCTCATGTAGCAAATGAGCTTCAAGTTCCGCTGCTATCATTCTCGGCAACAGACCCAACCCTTTCTCCACTTCAGTTCCCATTCTTCGTCAGAACTGCTATGAATGATCTTTTTCAGATGACTGCAATAGCAGAATTTGTTGAATTCTATGGGTGGAGAGAGGTTATTGCAGTTTATGTTGATGACGACTACGGGAGAAATGGCATCTCTGCGTTAGGGGATAAGCTTGCTGAGAGACGTTGTAAGATCTCATTTAAAGCACCAATGCCCGCTGAAGCAACTAAGGAGGACATTACTGATGTGCTTGTTCAGGTTGCTCTTGCAGAATCTCGGATTATAGTTCTTCACACTGATCCTGCTTTGGGGGCTAAGGTTTTCAGTGTGGCAAAGAATCTTGAGATGATAAGAACTGGGTATGTCTGGATAGCCACTACTTTCCTTTCTACTCTGCTGGATACTGCCAGGTCCCTCCCTTCAGATGAAAAGCAGGACATTCAAGGAGTTGTTACACTACGCATGTACACACCAGAGACAGAGCTGAAAAGGAGATTTGTTTCTAGGTGGAAAAACTTGACTAGAGGAAACACTGCTAATGGCCCCATGGGACTGACTACTTATTGTCTCTATGCATACGATACTGTTTGGTTACTTGCTCGTGCAATTGACACATTTTTCAAAGAAGGGAATCGAATTACCTTTTCaaatgattcaaatttatctGATCTACGTGGAGGCAGCTTACATCTTGATGCTTTGACCATTTTCAATGAAGGGAATAAATTGCGTAGTAGTATTTTAGGTGTTAACATGACTGGTGTAACAGGTCAAGTCAAGTATACATCTGATGGGAACCTTGTTAATCCAGCATATGAAGTCCTCAATGTGATAGGGACAGGAACTCGGAGGATTGGTTATTGGTCTAATTACTCTGGATTATCAGTTGTTCCTCCTGAATCACTTTATTCAAAACCAGCCAATCATTCTTTTGCTAATCCAAAGCTTCTTGAAGTGATTTGGCCGGGAGATACAACCCAGAAGCCTCGTGGTTGGGTTTTTCCCAACAATGGAAGGCATTTAAGAATTGGTGTACCAAAAAGGGATAGTTACCTTGAATTTGTCTCTCAAGTACCTGGCACAGATCAATTCAAGGGGTTCTGCATTGACGTATTTGTTTCTGCAGTGAACTTGTTGCCCTATGCTGTCCCATATAAGTTTGTCCTATCTGGGGATGGTGACAACATCCCTGGTGAGCTTGTCAGTCAGGTCACAGCAGGAGTCTTTGATGCTGTAGTGGGTGACATTACAATTACTACAGAGAGAACAAAGATGGTGGATTTTACTCAACCATATGTCGAGTCTGGTCTAGTAGTAGTAGCGCCCATCATGAAGATGGAATCTAGTGCTTGGTCGTTTCTGAGGCCATTTACTCCATTGATGTGGGCTGTCACAGCTATCTTCTTCCTAGTAGTGGGAGCTGttatttggattttggaaCATAGGCTGAACGATGATTTTCGAGGACCTCCCAAAAGACAagcaattacaattttatggTTTAGTTTTTCAACTATGTTCTTTGCCCAGAGGGAAAATACAGTGAGCACTCTTGGTCGCTCTGTGCTGATTATATGGTTATTTGTAGTTCTTATAATTAACTCAAGTTACACTGCAAGCCTGACTTCGATCCTCACAGTGCAACGGCTTGCTTCCCCTATTAAAGGCATCGAAAGTCTAATCAATAGCAAAGATCCAATTGGGTACCAGATAGGTTCTTTCGCtagaaattatttgattgagGAAGTTGGTATTGATAAATCTAGACTTGTTCCCCTAAAGACACCAGAAGAGACTGCTAAAGCATTGAAAGATGGTCCCAATAATGGTGGTGTTGCTGCATATGTCGATGAACGTGCATACATGGAGCTCTTTCTTTCAAGTCGGTGTGATTTTACCATTGTAGGCCAGGAATTCACTAGAAATGGATGGGGATTTGCCTTTCCAAGAGACTCGCCTTTAGCAGTGGACATGTCGACTGCCATTCTGGAATTGGCTGAGAATGGAGATCTACAAAGGATCCGTGACAAATGGCTTTTGAGCAGCGCTTGCTTATCTCAGAATGCAAAGTTTGAAGTGGACAGACTTAATCTCAAAAGCTTTTGGGGTCTCTATCTAGTCGCTGGATTGGTTTGTCTTCTTgctttaatcatatatattataacgATAACGAGGCAGTACTGCAAGCACCAGTCAGGGGAACTTGAGTCTCATAGCCAACAAAGCCAAGGATCTTCGTCTGTTCGGACTTTCCTTGCATTTGtagacaaaaaagaagaggaggtTAAGAGTCAGTCCAAGAGAAGGCAAATGGAGAGGATCTCCTACAGAAACAGTGATGGTGGATCAAGCTCGGTCTTCACATCCAATAAAGGGGATGCTCAATCTCCAGCTTCAAACAGAAGCATTGATGGTGCTAATACATA 2819 0.4076 MMGVWFVVFMVLSNGFSPTWADMNNSTVPDSVNIGVLYSFNATIGKILKIAIEAAVEDVNSDSSVLGKTQLKVLMQEDSKYKGFLSIVETLQLMAKQTVAVIGPQSSITAHVISHVANELQVPLLSFSATDPTLSPLQFPFFVRTAMNDLFQMTAIAEFVEFYGWREVIAVYVDDDYGRNGISALGDKLAERRCKISFKAPMPAEATKEDITDVLVQVALAESRIIVLHTDPALGAKVFSVAKNLEMIRTGYVWIATTFLSTLLDTARSLPSDEKQDIQGVVTLRMYTPETELKRRFVSRWKNLTRGNTANGPMGLTTYCLYAYDTVWLLARAIDTFFKEGNRITFSNDSNLSDLRGGSLHLDALTIFNEGNKLRSSILGVNMTGVTGQVKYTSDGNLVNPAYEVLNVIGTGTRRIGYWSNYSGLSVVPPESLYSKPANHSFANPKLLEVIWPGDTTQKPRGWVFPNNGRHLRIGVPKRDSYLEFVSQVPGTDQFKGFCIDVFVSAVNLLPYAVPYKFVLSGDGDNIPGELVSQVTAGVFDAVVGDITITTERTKMVDFTQPYVESGLVVVAPIMKMESSAWSFLRPFTPLMWAVTAIFFLVVGAVIWILEHRLNDDFRGPPKRQAITILWFSFSTMFFAQRENTVSTLGRSVLIIWLFVVLIINSSYTASLTSILTVQRLASPIKGIESLINSKDPIGYQIGSFARNYLIEEVGIDKSRLVPLKTPEETAKALKDGPNNGGVAAYVDERAYMELFLSSRCDFTIVGQEFTRNGWGFAFPRDSPLAVDMSTAILELAENGDLQRIRDKWLLSSACLSQNAKFEVDRLNLKSFWGLYLVAGLVCLLALIIYIITITRQYCKHQSGELESHSQQSQGSSSVRTFLAFVDKKEEEVKSQSKRRQMERISYRNSDGGSSSVFTSNKGDAQSPASNRSIDGANT 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00967 939 MobiDBLite consensus disorder prediction 890 939 - -
Bva08g00967 939 Gene3D - 467 580 - -
Bva08g00967 939 Gene3D - 148 425 - -
Bva08g00967 939 SMART GluR_14 471 812 IPR001320 GO:0015276|GO:0016020
Bva08g00967 939 CDD GluR_Plant 472 810 - -
Bva08g00967 939 Pfam Bacterial extracellular solute-binding proteins, family 3 492 810 IPR001638 -
Bva08g00967 939 Gene3D - 581 706 - -
Bva08g00967 939 PIRSF IGluLR_plant 1 937 IPR017103 -
Bva08g00967 939 Pfam Ligand-gated ion channel 811 841 IPR001320 GO:0015276|GO:0016020
Bva08g00967 939 CDD PBP1_GABAb_receptor_plant 33 429 IPR044440 -
Bva08g00967 939 Pfam Receptor family ligand binding region 50 410 IPR001828 -
Bva08g00967 939 SUPERFAMILY Periplasmic binding protein-like II 448 812 - -
Bva08g00967 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 45 61 - -
Bva08g00967 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 323 335 - -
Bva08g00967 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 106 134 - -
Bva08g00967 939 PRINTS Metabotropic glutamate GPCR signature 168 185 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bva08g00967 939 PRINTS Metabotropic glutamate GPCR signature 101 127 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bva08g00967 939 PRINTS Metabotropic glutamate GPCR signature 152 168 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bva08g00967 939 PRINTS Metabotropic glutamate GPCR signature 133 152 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bva08g00967 939 MobiDBLite consensus disorder prediction 890 906 - -
Bva08g00967 939 Gene3D - 50 400 - -
Bva08g00967 939 SUPERFAMILY Periplasmic binding protein-like I 27 464 IPR028082 -
Bva08g00967 939 Gene3D - 745 772 - -
Bva08g00967 939 Gene3D - 773 809 - -
Bva08g00967 939 PANTHER GLUTAMATE RECEPTOR 17 924 - -
Bva08g00967 939 MobiDBLite consensus disorder prediction 907 939 - -
Bva08g00967 939 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 17 924 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00967 Bva-Chr8 4910247 4914616 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00967 5 910 Ion Channels AT3G51480 60.330 0.0 1136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00967 K05387 - gmx:100788917 1362.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00967 08 4910247 4914616 Bva11g01443 11 14068659 14073486 BWGD
Bva08g00967 08 4910247 4914616 Bva08g00967 08 4910247 4914616 ECH
Bva08g00967 08 4910247 4914616 Bva11g01443 11 14068659 14073486 ECH