Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00963 ATGGCTCCAGGGAGTGATTGCTCGCCTCAGACAACTACATTAACTTGTGAGTGCATCAAGGGCAATAATAGTGTATCTACTATGGAGGATCAGATTGATGACACCGTGGGAAATTTGAATCAGAATATTGGGAAACCTCCAAGAGATCTTTCTGCAGCACGCCATTGGGGCAGCTCTTCATGGCTTGCTGAAGCGGACTCAGACATTGGGATTATTGGCCTCAAATCAGCCCCAGAACAAAAATCAGAGTTTCAACCTGTATTTCGATCTGGAAGCTGTTCTGAGAAAGGACCAAAGCAGTACATGGAGGATGAGTATATATGTGTTGATGACCTCAGTGAAAATCTTGGTCCAGGAGCTAATATCCCTTCCCCAGGGGCATTTTATGGGGTATTCGATGGACATGGTGGTGTTGATGCAGCATCATTTACCAAAACGAACATCCTTAAGTTAATCGTTGAAGATGCCCATTTCCCATCTGGCATAAAGAAGGCTGTTAAGAGTGCATTTGCGAAGGCTGATCATGCATTTGCAGATGCTAAATCCCTTGATAGTTCCTCAGGCACCACTGCTTTGACAGCCCTAATGTTGGGAAGgACGACTCTAATTGCTAATGCTGGGGATTCCCGTGCTGTATTGGGAAAACGAGGAAGAGCCATTGAACTTTCTAAAGACCATAAACCAAATTGCACGTCTGAAAGATTAAGAATTGAGAAACTGGGTGGTGTCATCTATGATGGGTACCTCAATGGCCAACTATCAGTGGCACGAGCCCTTGGAGACTGGCACATCAAGGGTTCTAAAGGTTCAAAAAGTCCTTTAAGCTCAGAGCCTGAATTGGAGGAGATTCTTCTGACAGAAGAAGACGAGTTTCTGATACTGGGCTGTGACGGGTTATGGGATGTGATGAGCAGCCAGTGTGCTGTCACAATGGTGAGGAAGGAGCTGATGCAGCATAATGATCCAGAGAGGTGCTCAAAGGCACTTGTGAAAGAGGCACTCCAACGCAACTCATGTGATAATCTCACTGTTGTGGTTGTCTGTTTCTCAAAAGACCCACCTCCGAAAATTGAAATTCCTAGATCTCATAGGAGGAGGAGCATATCAGCTGAAGGCCTGGATCTTCTCAAGGGTGTCTTGAACAATGGTAGATG 1154 0.4541 MAPGSDCSPQTTTLTCECIKGNNSVSTMEDQIDDTVGNLNQNIGKPPRDLSAARHWGSSSWLAEADSDIGIIGLKSAPEQKSEFQPVFRSGSCSEKGPKQYMEDEYICVDDLSENLGPGANIPSPGAFYGVFDGHGGVDAASFTKTNILKLIVEDAHFPSGIKKAVKSAFAKADHAFADAKSLDSSSGTTALTALMLGRTTLIANAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSSEPELEEILLTEEDEFLILGCDGLWDVMSSQCAVTMVRKELMQHNDPERCSKALVKEALQRNSCDNLTVVVVCFSKDPPPKIEIPRSHRRRSISAEGLDLLKGVLNNGR 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00963 384 Pfam Protein phosphatase 2C 90 341 IPR001932 -
Bva08g00963 384 SUPERFAMILY PP2C-like 83 350 IPR036457 -
Bva08g00963 384 SMART PP2C_4 79 347 IPR001932 -
Bva08g00963 384 PANTHER PROTEIN PHOSPHATASE 2C 47-RELATED 8 371 - -
Bva08g00963 384 CDD PP2Cc 88 349 IPR001932 -
Bva08g00963 384 ProSiteProfiles PPM-type phosphatase domain profile. 89 349 IPR001932 -
Bva08g00963 384 PANTHER PROTEIN PHOSPHATASE 2C 8 371 IPR015655 GO:0004722|GO:0006470
Bva08g00963 384 SMART PP2C_SIG_2 104 349 IPR001932 -
Bva08g00963 384 ProSitePatterns PPM-type phosphatase domain signature. 128 136 IPR000222 GO:0043169
Bva08g00963 384 Gene3D - 74 353 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00963 Bva-Chr8 4890093 4893580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00963 72 381 PP2C-type Phosphatase Gene Family AT3G51470 81.935 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00963 K14803 - zju:107424335 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00963 08 4890093 4893580 Bva08g00963 08 4890093 4893580 ECH
Bva08g00963 08 4890093 4893580 Bva11g01441 11 14058452 14061043 ECH