Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00960 ATGTCGTGCTCATCTTCATCCGGgtctgaagaagaagatgaggaCTTCGACTCCTATAGAAAAGGTGGTTACCACGCCGTCAGGGTCGGCGATCAGTTCGCCGGCGGCAGATACATAGCGCAGAGGAAACTGGGTTGGGGTCAGTTCTCCACCGTGTGGCTTGCTTATGATACTCAAACCAAAACGTATGTTGCTCTTAAGATACAGAAAAGTGCACCCCAGTTTGCTCAGGCTGCCCTTCACGAGATAGAAGTCCTTTTAGCCATTGCTGATCGCGATCCATCGAATTCAAAGTGTGTTGTCCAACTGATTGACAACTTTAAGCACACAGGCCCAAATGGGCAGCACCCATGCATGGTCCTTGAATTTCTTGGGGATAGCTTGCTTCGGCTGATCAAATATAACCGTTATAAAGGCCTTCCGATGAATAAAGTGAGGGAAATTTGTAAATGCATTTTGATTGGTCTGGATTACTTGCATAGAGAACTTGGTATAATTCACACTGACTTAAAACCTGAAAATATTCTTCTCTTTAACACCATTGATCCTGCCAAAGATCCTGTTAGATCTGAACTTGCTCCAATCCTAGAGAGGCCCGAGGGAGGTCTAAACGGTGGAGGAGTTACAAGTCTTATtgagaaaaagatgaaaaggaggGCGAGGAGGGCAGTTGCTAAGATATCTGAAAGAAGAATTTCTATGGGAGTAATAGGAGAACCTCCCAAGTCTGATAGAAACATTGGTGGGATTGATGTTAGATGTAAGATAGTAGATTTCGGAAGTGCATGTTGGGCTGATAAGCAGTTTGCAGAAGAAATCCAGACAAGGCAATATAGAGCTCCTGAAGTTATACTGCAGGCTGGGTATTCCTTCTCTGTTGACATGTGGTCTTTTGCATGCACTGCTTTTGAGCTTGCCACTGGTGATATGATGTTTACTCCTCAGTCTGGACAAGGATTTAGTGAGGATGAGGATCACCTTGCCCTGATGATGGAACTACTTGGAAAGATGCCCCGGAAGGGTGCTGTCACTGGAGCTCGATCCAAGGATTTCTTTGACAGGCACGGGGATCTCAAGAGGATTCGAAGGCTCAAATTCTGGCCAGTCGACAAATTGTTGATTGAGAGATACAAGTTTTCAGAGACTGATGCTCGTGAGTTTGCAGAATTTCTTGTACCAATTCTTGATTTTTCACCAGAGAAGCGACCAACGGCACAGCAGTGCCTGCAACACCCATGGCTCCAACACAAGAATTCATCTCAGGACAAACAGATAAATGAACCCAGCTTGGAGAAGGTGGACGTTGGGATGAGTAACCTCAAAATCAAGGTGGGAAAGTG 1340 0.4403 MSCSSSSGSEEEDEDFDSYRKGGYHAVRVGDQFAGGRYIAQRKLGWGQFSTVWLAYDTQTKTYVALKIQKSAPQFAQAALHEIEVLLAIADRDPSNSKCVVQLIDNFKHTGPNGQHPCMVLEFLGDSLLRLIKYNRYKGLPMNKVREICKCILIGLDYLHRELGIIHTDLKPENILLFNTIDPAKDPVRSELAPILERPEGGLNGGGVTSLIEKKMKRRARRAVAKISERRISMGVIGEPPKSDRNIGGIDVRCKIVDFGSACWADKQFAEEIQTRQYRAPEVILQAGYSFSVDMWSFACTAFELATGDMMFTPQSGQGFSEDEDHLALMMELLGKMPRKGAVTGARSKDFFDRHGDLKRIRRLKFWPVDKLLIERYKFSETDAREFAEFLVPILDFSPEKRPTAQQCLQHPWLQHKNSSQDKQINEPSLEKVDVGMSNLKIKVGK 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00960 446 PANTHER OS07G0472400 PROTEIN 7 420 - -
Bva08g00960 446 CDD STKc_SRPK 27 414 - -
Bva08g00960 446 Pfam Protein kinase domain 39 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00960 446 Pfam Protein kinase domain 253 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00960 446 ProSiteProfiles Protein kinase domain profile. 38 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00960 446 SUPERFAMILY Protein kinase-like (PK-like) 32 421 IPR011009 -
Bva08g00960 446 SMART serkin_6 38 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00960 446 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 7 420 - -
Bva08g00960 446 Gene3D Transferase(Phosphotransferase) domain 1 92 414 - -
Bva08g00960 446 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Bva08g00960 446 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Bva08g00960 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00960 Bva-Chr8 4878942 4883125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00960 4 415 EF-hand Containing Proteins AT5G22840 50.759 4.25e-163 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Bva08g00960 Pkinase 7.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00960 K08832 - jre:108984275 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00960 08 4878942 4883125 Bva08g00960 08 4878942 4883125 ECH