Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00955 ATGGGAGGCTTATTTCACATTTTTGAGTTCAACCGGGGGAGTATGGCCAAGAAAGTTCATAGCCACAAGAGACATCATGGTGGCCTGGAAGCTCCTCGAAATAGCCTGGAGCTACAAGTTGAAGCATCTCAAGCATGCTGTCCAGAAGGAGAATTACCGCACTATTATCGAGTAGAAGACGACTGGTCAGAGAATAATCGTTATTCAAATGTGGCTTCAATGAAGAAACTGATCAATGAGGAGTTATCTAGACGACCAAGCACCAGACAGAACGCACCAAGCGTTGTGGCAAGGTTGATGGGGATAGATATGTTGCCATTAGACACTAAATCTGTTATTCTGTCcgatgaaagaaaaagtggaAATGTGGGGATGAGGTTTTTGAAGAAGGAAATGGATGGAAGGGATTCAGTTGGTCCGGGGGGCTTTTCCAACTCAAATTCTTCTAACCAGATGGAATTTGACTCAATTTATCAAGAAATAGATGATGATGGATGGGACCAGAGTTTTGGAAAACCAAGACCACGGGAACATCCTCAGGAAGAGGaactacaaaaatttaaaaaagaatttgaagcaTTTCAAGCAGCAAGATTTATGGAGTGTTCAAAGATAGTTGATCTTGGCAGTGTTTCTAGACAATTGCTTGCTCAAGAGAAcctgaacaaagaaaaaatggaacaTTGTCCAAATAACCAGAGAGTGGCAACAGAGAAACCTGCAGAGCTTAACAACCACTCATTTAACACACAGATGTACAATGGCGGTTATGCAGAATATCATGGTGATCTGATGGAATTAATCCCAGCTAAGCAAGGGAGACCCTTTTCTTCAAGAAGCAGAACCCTGAGTAGAGACTTCGAGGAGTCTTTAATGATGAAATCTAAAAGCAGATTAGATAAATCATCTCCTAATAGGATAGTAATCTTGAAGCCAGGTCCTGATAGAATTTTCAACCACGGAGAGAATTTGAACAGTTCATCAGGCACTTTACAAGAGAGAAATAGTATAGAGGATTTTCTTGAGGAGGTGAGAGAGCGGCTGAAATGTGAACTGCAAGGGAAAACTCACAAAAAGGGTTCTGTGGTTAGAGGAAGTGGGATTGAAACACCTTACAATGAAAAACCATCAGATCCTAAACAGATAGCACGTCATATAGCAAAACAGGTCAGAGAAAGTGTGACTAGAGATGTTGGAACTAATTTGCTGCGCTCAGAATCAACTAGATCCTACAGAAGTGAAATTCAGttcaatggaccaagttcccCAGAATTTGTGAGCAGAGATACCCGGAGATTCTTGTCAGAGAAGCTAAGAAATGTTCTAAAAAGTGAATCACATCTTGACATTGCTGAAGTGGCTTGTGGGAACTCAAAGTCGTATGTGTTAGATAATCACAAGGTTAGCCTAAAACAATCAGGGGATATCTTGAAGAGTGGAAATGACACGAGCCAATGggaaatttcaaaagaaggaaaggaaatgcaAACAGGATCTTTTAGGCATGAACCAGATGACAATATCTTTCTCCACAGGGAGCCGTCCCCTAGGAACCTGGTTAGATCCTTGTCTGCCCCTGTATCAGGAACATCATTTGGGAAGCTTCTTCTAGAGGACCGCCACATTTTAACTGGTGCCCATATTCGGAGGAAGCTTGAAGCCATTGAAACCGTGTCTGTTGATGTCAGAAaacggaaaaaagaaagatttaatatcaaagaaaaagtttccaattttaaatatagtcTAGTTCTAAGAGGGAAGCTTTTTGGAAAAAGGATTCAATCAATGGTTGAGCCACATGGCAACGAGTATGATCCCATGGTAAGAGATGTCACTAGTGGACCAACAGTTCTCTTGAGCTGTGGTGAGAGGCTTGAGAACTCCACTGAGGTGCCCCCTAGTCCTGTATCTATATGCAGCAGTGCTCAAGAAGAACTCTGGAGGCGAGCTGAATGCTTAAGTCCAATGTCAACTCCAGATGTATCTTCTAGAGATGACAACGTTGTGCCACAAGTTTTCAGAGATATCAGCTCTAACTTGAATGCGCTGAGGAGGCAACTGAATCAACTTGAGTCTGATGCCTCTGATGACTTCACAATCAAACAGGATACTGTTGAGTCTGAACTAGTTCAATTAGAGGACCCAGCTGAATCCTACATAAGAGATCTTCTTGTTGCTTCTGGTCTATACTTTGGTTCATGGGATAAATCTTTATTAAGAGGGGACACATTTGCCAAGCCTATTGGCAACTCAGTTTTTGAAGAAGTAGAAGAATCTCATAGGAAATCAGCCAAGGAGAATGAAAGTTCTATAAAGGAGCAGAAGTTAGAGCACAAGATATTACTTGATTTGTTAAATGAGGCACTTGCCATTGTTCTTGGACCACCACAGGCGATGTCTAGATTCAGAAGGAAATTAAGCAGTTCCTCCCTGCCACCACCACCAATTGGAAAGGAACTGCTGAAGTTAGTATGGGACATTATCCGCGTTTCTTTGTATCCTCCATTTGACATATCTTCTAATTCTGTTGATAATTTGGTGGCTCGAGATCTGGGATCTATTCCCTGGTCTGCATTGACAAATGACGAGATTACTGTTCTGGAAAGAGAGTTTGAATGGCTAATTACTAAAGATTTGATTGAAGAAATCACAAAGGATATGCTGTTAGGTGTAGCTTG 2681 0.3935 MGGLFHIFEFNRGSMAKKVHSHKRHHGGLEAPRNSLELQVEASQACCPEGELPHYYRVEDDWSENNRYSNVASMKKLINEELSRRPSTRQNAPSVVARLMGIDMLPLDTKSVILSDERKSGNVGMRFLKKEMDGRDSVGPGGFSNSNSSNQMEFDSIYQEIDDDGWDQSFGKPRPREHPQEEELQKFKKEFEAFQAARFMECSKIVDLGSVSRQLLAQENLNKEKMEHCPNNQRVATEKPAELNNHSFNTQMYNGGYAEYHGDLMELIPAKQGRPFSSRSRTLSRDFEESLMMKSKSRLDKSSPNRIVILKPGPDRIFNHGENLNSSSGTLQERNSIEDFLEEVRERLKCELQGKTHKKGSVVRGSGIETPYNEKPSDPKQIARHIAKQVRESVTRDVGTNLLRSESTRSYRSEIQFNGPSSPEFVSRDTRRFLSEKLRNVLKSESHLDIAEVACGNSKSYVLDNHKVSLKQSGDILKSGNDTSQWEISKEGKEMQTGSFRHEPDDNIFLHREPSPRNLVRSLSAPVSGTSFGKLLLEDRHILTGAHIRRKLEAIETVSVDVRKRKKERFNIKEKVSNFKYSLVLRGKLFGKRIQSMVEPHGNEYDPMVRDVTSGPTVLLSCGERLENSTEVPPSPVSICSSAQEELWRRAECLSPMSTPDVSSRDDNVVPQVFRDISSNLNALRRQLNQLESDASDDFTIKQDTVESELVQLEDPAESYIRDLLVASGLYFGSWDKSLLRGDTFAKPIGNSVFEEVEESHRKSAKENESSIKEQKLEHKILLDLLNEALAIVLGPPQAMSRFRRKLSSSSLPPPPIGKELLKLVWDIIRVSLYPPFDISSNSVDNLVARDLGSIPWSALTNDEITVLEREFEWLITKDLIEEITKDMLLGVA 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00955 893 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 889 - -
Bva08g00955 893 Pfam DUF761-associated sequence motif 91 106 IPR032795 -
Bva08g00955 893 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 889 - -
Bva08g00955 893 Pfam Domain of unknown function (DUF4378) 719 883 IPR025486 -
Bva08g00955 893 Coils Coil 674 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00955 Bva-Chr8 4852459 4857554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00955 74 888 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 39.573 2.40e-155 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00955 - - gmx:100779720 1208.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00955 08 4852459 4857554 Bva11g01435 11 14035996 14040384 BWGD
Bva08g00955 08 4852459 4857554 Bva08g00955 08 4852459 4857554 ECH