Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00949 ATGGAATATTCTCGACCCACTCTCACAGCTCTCGTAGTTTTCATGAACACTGTTAGAGAAGAGTTGATCAGAAGCGTGCATGTCTACCGGTTACAGGATGGAAAGCAAAGCGAAGTTGAGAGAGAGTTTTATTTTCCGGAGAATGGCTCATATGTAGAAATGCGGGCAAGCCCAATTCTTAGGTTGCAGGAATTTCATGCTTCTAAAATTCTTGAAGGATACCAGAATGGTGTTTGGCTCTGTATCTTTGCGTTTCACACCGATCACAGGCCTCCATTTTCCAGCATTCCTTCACTGTTGTCAGTCACGAGAAATCCCAAGCTTCGGACGATCCCAACTTTGTTTAATGACCTCTATCTGATAAACAAGCTGGACTGCCTGTCAGAAGGGAAAGTTATTCAACAAATCATGCCTGAGGAAAGATTCCAGGCAAATGGCAACGGTGATCATCCTTCTAGAAAAATCTTGCCTGTACTTGATCAGGATCTCAATTCTCTTCCTTATTCAGTTGACATGTCTGAGTTACCAGACAATGGGCTAGTTGATGAAAGCTTAACAGGTAAtacagagaagaaaaggagggCAGCTACTGCAcacataaagaaaattgatttaccAGAGTTAGTCAAGTACTTTGGTATGCCAATTGTAGAAGCATCAAGAAATCTAAATGTTGGGCTTACTGTACTCAAGAGGAAGTGTAGAGAATTTGGTATTCCCCGCTGGCCTCATAGGAAGATTAAATCACTTGACAATCTTATCCATGATCTTCAGGAAGaggcaaaacaaaaagaaccaGAGAGTGAGGCTGCAGCTGTGGCAGTAATAACGAGACAACGGATGCTGgaaagtgaaaaggaaaatatagaaaagaaacCCTTCATGGACATACAAAGTGAGACCAGGAAATTCAGGCAGGATGTCTTCAAGAGAAGGCATAAAGCTAGAGCTAAACAGAGTTCTGGAGTCTCCAGTAGTCAGTA 983 0.3896 MEYSRPTLTALVVFMNTVREELIRSVHVYRLQDGKQSEVEREFYFPENGSYVEMRASPILRLQEFHASKILEGYQNGVWLCIFAFHTDHRPPFSSIPSLLSVTRNPKLRTIPTLFNDLYLINKLDCLSEGKVIQQIMPEERFQANGNGDHPSRKILPVLDQDLNSLPYSVDMSELPDNGLVDESLTGNTEKKRRAATAHIKKIDLPELVKYFGMPIVEASRNLNVGLTVLKRKCREFGIPRWPHRKIKSLDNLIHDLQEEAKQKEPESEAAAVAVITRQRMLESEKENIEKKPFMDIQSETRKFRQDVFKRRHKARAKQSSGVSSSQ 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00949 327 PANTHER PROTEIN RKD4 12 319 IPR044607 GO:0003700
Bva08g00949 327 MobiDBLite consensus disorder prediction 308 327 - -
Bva08g00949 327 Pfam RWP-RK domain 203 250 IPR003035 -
Bva08g00949 327 ProSiteProfiles RWP-RK domain profile. 185 270 IPR003035 -
Bva08g00949 327 PANTHER PROTEIN RKD5 12 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00949 Bva-Chr8 4814490 4818687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00949 15 326 AtRKD Transcription Factor Family AT4G35590 46.809 3.51e-88 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Bva08g00949 RWP-RK 2.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00949 - - adu:107475952 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00949 08 4814490 4818687 Bva08g00949 08 4814490 4818687 ECH