Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00943 ATGGTTATTTCTGATGAGAACAATTCGAACTTGATCAAACCCGCGAATTTCGAAGGAGGGATAGAAATGGATAACAGAAAGTTTGGGCTGGAGATTGGACACAACAGGAGAGCGTTAGGTGCGATTAATCAGAATCTGGTTGAAGGTCGACCGTATCCTTGCGTTGTTCACAAGAGAGGATTGTCGGAAAAGcatgaaatttatgaaaagaagCAGGCGGATCCAGGGCATCGACCAATCACGAGGAGGTTTGCTGCACAGATTGCTGGCTTGCAGCAATCTCAAGCCGAGGAAATCAAGAAGTCAAAGCCgtcaatttcaaattcaaatgattTTGGAGAATGTATATTCATTGATGATGAGCACAAGTTACTGGCAGACCAACCAGTGCCCATGTCTCTAGAGAAATCAGAAGCAGTAAATAGTGAACCTGATCAGatgGAGGAAATTGAGATGGAGGATATAGTTGAAGAACCTATTGTGGACATTGATAGCTGCGATGCAAATAACCCTCTTGCAGTTGTTGATTATGTTGAAGATCTTTATGCCTACTACAGAAAAATGGAGAGTTTTAGCTGTGTCTCACCGGCTTATATGGATCAACAATTTGATATTAATGAAAGGATGAGGGCTATATTGATAGACTGGCTTATTGAGGTGCACGACAAATTTGACCTCATGCACGAGACTTTGTTCCTTACTGTTAATCTGATAGATAGATTTTTGGAGAAGCAGAAAGTGGTGAGAAAGAAGCTTCAGTTGGTTGGCTTGGTTGCCATGCTTTTAGCATGTAAATACGAAGAAGTTTCCGTACCTGTGGTTGGAGATCTAATCCTTATATCAGACAAAGCATACACAAGGAAGGAAGTTCTGGAAATGGAGAAGTTGATGCTCAACACACTGCAGTTTAACATGTCGGTGCCAACACCATATGTTTTTATGAGAAGGTTCGTAAAGGCAGCTCAAGCTGACAAAAAGCTTGAGCTACTAGCTTTCTTCTTGATAGAACTCTCTCTTGTGGAATATGAGATGCTCAAGTTCCCACCATCTTTGCTAGCTGCAGTTGCTGTTTATACAGCTTACTGTACCATCTATGGTTTGAGACAGTGGAGCAAGACTTGTGAATGGCATACAAACTACTCGGAAGATCAGCTATTAGAATGCTCAAGTTTGATGGTTGATTTGCACCAGAAGGCTGGAACAGGAAAGCTTACGGGAGTATATAGGAAGTACTGCAGCTCTAAATTTTGCTATACTGCAAAATGTGAAGCAGCACGTTTTCTTCTGGAGAGCCAACGGTA 1301 0.4074 MVISDENNSNLIKPANFEGGIEMDNRKFGLEIGHNRRALGAINQNLVEGRPYPCVVHKRGLSEKHEIYEKKQADPGHRPITRRFAAQIAGLQQSQAEEIKKSKPSISNSNDFGECIFIDDEHKLLADQPVPMSLEKSEAVNSEPDQMEEIEMEDIVEEPIVDIDSCDANNPLAVVDYVEDLYAYYRKMESFSCVSPAYMDQQFDINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQKVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKEVLEMEKLMLNTLQFNMSVPTPYVFMRRFVKAAQADKKLELLAFFLIELSLVEYEMLKFPPSLLAAVAVYTAYCTIYGLRQWSKTCEWHTNYSEDQLLECSSLMVDLHQKAGTGKLTGVYRKYCSSKFCYTAKCEAARFLLESQR 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00943 433 Gene3D - 194 306 - -
Bva08g00943 433 Gene3D - 180 420 - -
Bva08g00943 433 SUPERFAMILY Cyclin-like 307 424 IPR036915 -
Bva08g00943 433 Pfam Cyclin, C-terminal domain 308 422 IPR004367 -
Bva08g00943 433 PANTHER CYCLINS 25 428 IPR039361 -
Bva08g00943 433 ProSitePatterns Cyclins signature. 210 241 IPR006671 -
Bva08g00943 433 SMART cyclin_7 312 394 IPR013763 -
Bva08g00943 433 SMART cyclin_7 215 299 IPR013763 -
Bva08g00943 433 SUPERFAMILY Cyclin-like 169 305 IPR036915 -
Bva08g00943 433 CDD CYCLIN 209 298 IPR013763 -
Bva08g00943 433 SMART Cyclin_C_2 308 425 IPR004367 -
Bva08g00943 433 Pfam Cyclin, N-terminal domain 180 306 IPR006671 -
Bva08g00943 433 PANTHER CYCLIN-B2-1 25 428 - -
Bva08g00943 433 PIRSF Cyclin_A_B_D_E 15 433 IPR039361 -
Bva08g00943 433 CDD CYCLIN 306 393 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00943 Bva-Chr8 4781482 4784309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00943 22 429 Core Cell Cycle Gene Families AT2G17620 66.024 4.40e-177 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00943 K21777 - gmx:100798068 660.218