Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00942 ATGTCAATGGCTACTTCGCCACACACTCATCTTCTCCAAAACCCTAATCATCTCCTCAAGAATCCCACCACCCATAACAATGCTTTCCCTGTTACCTCCGTGCGCACCTTTAGCAAAACCTCTACCAGACCCATTTCGATAAAATGCGTCGCACCAACAGCCACACCCACCCAGGATCTTCCTTCGGCTCCGGCCCCATCCCAAGATCGGGTCTTTAACTTTGCTGCTGGACCTGCAACCTTGCCCGAGTGCGTGCTCAGGAAGGCTCAGGCGGAGCTCTATACTTGGGGCGGATCCGGCATGAGCGTAATGGAAATGAGCCACAGGGGCAAGgattttctttccataatCCAGAAGGCTGAAGCGGATCTGCGTACCCTTATGGATATTCCAGAGGAATacgctgttttatttttgcaagGCGGCGCCACCACCCAATTTGCTGCGCTCCCTTTGAACCTCGTCAAACCAGATGACACGGTTGATTATTTGGTCACTGGTTCATGGGGTGACAAGGCGTTCAAGGAGGCCCAGAAGTACTCCAAAGCCAAGGTGATTTGGTCTGGTAAGTCTGAGAAGTACACAAAAATTCCATCTTTTGATGCATTGGAGCAGAGTCCCGATGCCAAATATTTGCATATATGCTCCAACGAGACCATTCATGGGGTTGAGTTCAAGGACTATCCAACTCCCAAAAATCCAAATGGTATCTTGATTGCGGATAtgtcttcaaatttctgcTCGAAGCCTGTGGATGTGTCCAAATTTGGGGTGATCTATGCCGGAGCCCAGAAGAACGTGGGGCCAGCGGGTGTCACCATCGTTATAATCAGGAAGGATCTAATTGGCAATGCTCAGGAGGTGACTCCTGTGATGCTTGATTACAAGATACAATCCGAGAACAATTCACTGTACAACACTCCCCCTTGTTACACTATTTACATGTGTGGTTTGGTGTTTGAAGACCTTTTGCAGCAGGGGGGTTTGAAAGAGATTGAGAAGAAGAACGAGAAGAAGGCTGGAATTCTCTACGCTGCCATTGATGAAAGCAATGGTTTTTATAGATGCCCAGTTGAGAAGTCAGTGAGATCGTTGATGAATGTTCCTTTTACATTAGAGAAATCAGAACTAGAGGCTGAGTTCATCAAGGAAGCTGCTAAGGAAAAAATGGTTCAGCTTAAGGGGCACAGATCAGTTGGCGGTATGCGAGCTTCCATATACAATGCCATGCCTTTGGCTGGTGTTGAGAAGTTGGTGGCTTTCATGAAGGATTTCCAGGCCAGGCATGCCTA 1292 0.4636 MSMATSPHTHLLQNPNHLLKNPTTHNNAFPVTSVRTFSKTSTRPISIKCVAPTATPTQDLPSAPAPSQDRVFNFAAGPATLPECVLRKAQAELYTWGGSGMSVMEMSHRGKDFLSIIQKAEADLRTLMDIPEEYAVLFLQGGATTQFAALPLNLVKPDDTVDYLVTGSWGDKAFKEAQKYSKAKVIWSGKSEKYTKIPSFDALEQSPDAKYLHICSNETIHGVEFKDYPTPKNPNGILIADMSSNFCSKPVDVSKFGVIYAGAQKNVGPAGVTIVIIRKDLIGNAQEVTPVMLDYKIQSENNSLYNTPPCYTIYMCGLVFEDLLQQGGLKEIEKKNEKKAGILYAAIDESNGFYRCPVEKSVRSLMNVPFTLEKSELEAEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQARHA 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00942 430 Gene3D - 84 324 IPR015421 GO:0003824
Bva08g00942 430 Pfam Aminotransferase class-V 71 418 IPR000192 -
Bva08g00942 430 CDD PSAT_like 72 426 IPR022278 GO:0004648|GO:0006564
Bva08g00942 430 ProSitePatterns Aminotransferases class-V pyridoxal-phosphate attachment site. 256 275 IPR020578 -
Bva08g00942 430 TIGRFAM serC_1: phosphoserine transaminase 71 429 IPR022278 GO:0004648|GO:0006564
Bva08g00942 430 MobiDBLite consensus disorder prediction 1 22 - -
Bva08g00942 430 PANTHER PHOSPHOSERINE AMINOTRANSFERASE 39 430 IPR022278 GO:0004648|GO:0006564
Bva08g00942 430 PANTHER PHOSPHOSERINE AMINOTRANSFERASE 1, CHLOROPLASTIC 39 430 - -
Bva08g00942 430 Hamap Phosphoserine aminotransferase [serC]. 69 429 IPR022278 GO:0004648|GO:0006564
Bva08g00942 430 SUPERFAMILY PLP-dependent transferases 69 427 IPR015424 -
Bva08g00942 430 Gene3D Aspartate Aminotransferase, domain 1 326 430 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00942 Bva-Chr8 4777963 4779679 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00942 K00831 - zju:107424359 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00942 08 4777963 4779679 Bva11g01343 11 13602769 13609201 BWGD
Bva11g01420 11 13965098 13966690 Bva08g00942 08 4777963 4779679 BWGD