Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00938 ATGTTGCCAAGGTTGAAAAGATCATCctttgaagaaagagaggatGCAGGAAAAGAAGAGGAGGAGCAGGAAGAACTCAGTGAAACCGATAGTGAAGACGATGATGAGGGTGTGATTGAGCAAGCGGCGAATGagcagagaaagaagaagataataataagGGTGGTATACGGTAAAGGATCGACGGCGCAGTCAACTAGTAGCAGCTCTTCGACATTTTTGTGTTGTCAAGCTGATGAATGTGGCGTGGATTTACAAACGGCCAAGAAGTATCACCAACGCCACAAGGTCTGTGAGCGACATTCCAAAGCTGCTGTGGTCTTAGTCAGTGGCATTCGCCAGAGGTTCTGCCAGCAGTGTAGTAAATTTCACGAAATTTCAGAGTTCGATGACACCAAAAGAAGTTGTAGGGATAGATTAGCTGGTCATAATGAACGTAGAAGAAAGACACATGCAACGCTTACTCAGAGTGAGCAGTA 479 0.4175 MLPRLKRSSFEEREDAGKEEEEQEELSETDSEDDDEGVIEQAANEQRKKKIIIRVVYGKGSTAQSTSSSSSTFLCCQADECGVDLQTAKKYHQRHKVCERHSKAAVVLVSGIRQRFCQQCSKFHEISEFDDTKRSCRDRLAGHNERRRKTHATLTQSEQ 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00938 159 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 16 153 IPR044817 GO:0003677
Bva08g00938 159 SUPERFAMILY SBT domain 74 153 IPR036893 GO:0003677|GO:0005634
Bva08g00938 159 MobiDBLite consensus disorder prediction 15 39 - -
Bva08g00938 159 PANTHER - 16 153 - -
Bva08g00938 159 Gene3D - 66 137 IPR036893 GO:0003677|GO:0005634
Bva08g00938 159 MobiDBLite consensus disorder prediction 1 43 - -
Bva08g00938 159 ProSiteProfiles Zinc finger SBP-type profile. 73 150 IPR004333 GO:0003677
Bva08g00938 159 Pfam SBP domain 76 149 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00938 Bva-Chr8 4757896 4759189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00938 26 149 SBP-box Gene Family AT3G15270 50.000 1.08e-34 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bva08g00938 SBP 3.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00938 - - zju:107424290 170.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00938 08 4757896 4759189 Bva08g00938 08 4757896 4759189 ECH