Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00914 ATGAGTTATGACGGTTCTCTTCAGGTTTTTGACTCTCTACCACCTAATCTTGTCCCAGACGAAGAAGCATTTCCCTCGTGGAGCAACAAAGCAGACAATGCATGGCTGCTCATGGCAGCCACTCTGGTGGGCTTGCAGAGTGTTCCTGGGCTTGTAATTCTATATGGAAGCATGGTCAAACGAAAATGGGCTGTGAACTCTGCATTTATGGCCCTATATGCTTTTGCTGCGGTACTCATTTGTTGGGTTTTCTGGGCCCATAATATGGCATTTGGGACCTATCTGGTACCATTGTTGGGGAAGCCCAAGGCTTCACTGACTGGGAAATTTCTACTTGCTCAGTATGGACAGAGCTACATTCCAAGAGTTGATTTTGTTTACTATCAATTCGTTTTTGCTGCAATTACCGTTATATTGCTTGCTGGGTCTTTGCTGGGGAGAATGAATTTCTATGCATGGATGATGTTTGTTCCTATGTGGCTTACACTGTCTTACACCATAGGTGCCTTCACTATTTGGACTCATGCTGGGTTCCTCACATCGAGAATAATTGATTATGCTGGCGGCTTTGTGATTCATCTTTCTTCTGGGGTTGCTGGCTTCACAGCCGCTTATTGGGTTGGGCCAAGAACTTCAGAGGACAGGCAAAATTTTCCACCTAACAACATAATTCACATGCTTGGAGGTGCAGGGTTTCTGTGGTTGGGGTGGACAGGTTTCAATGGTGGAGCTCCATTTGAGGCGGGCAACATCGCATCCTTGGCCATCTTCAACACCCATCTATGCACCGCCACCAGTCTCCTGGTCTGGCTTTCCTTGGACCTAGTTGTATATAGGAAAAGCTCAGTTATTGGTGCCGTCCAGGGAATGATGTGTGGCCTAGTCTGCATCACACCAGGTGCAGGGTTGGTGGATCCATGGGCAGCAGTAATTATGGGAGCTATGTCTGGTTCAATTCCATGGTACACCATGATGGTGTTGCACAGGAGATCAGCATTCTTTCAAAGCGTGGATGACACGTTAGGGGTCTTCCACACCCATGCTGTGGCTGGTTTTCTTGGGGGTGTTCTTTCTGGTTTATTTGCCAAACCAAAACTTTTGGAAATGATGTATGGAACGGACATGGATTTCGGTACAGGCTTATTATACGGCTTCattgaaggaaaaatgggTCGAGGCTTCAAGCAAATGGGTTTCCAGATAATCGGAGCAGCTTTTATTACTGTGTGGAATGTCATTGTTACAAGCCTCATTTGTATCCTAATAGGACGCATCGTTGATCTTCGGATGAACGAAGAGGATCTTGAGATTGGTGACGATGCTGCTCACGGAGAAGAAGCCTATGCATTATGGGGCGATGGAGAGAGGACACGAATCCCTCGCCTGCACATAAATCCATCACTTCCTTCCTTCTGTCGTCGGAGACTTACAATTCCAATGGCAAAACAAGAAATGCGACCCTA 1463 0.4614 MSYDGSLQVFDSLPPNLVPDEEAFPSWSNKADNAWLLMAATLVGLQSVPGLVILYGSMVKRKWAVNSAFMALYAFAAVLICWVFWAHNMAFGTYLVPLLGKPKASLTGKFLLAQYGQSYIPRVDFVYYQFVFAAITVILLAGSLLGRMNFYAWMMFVPMWLTLSYTIGAFTIWTHAGFLTSRIIDYAGGFVIHLSSGVAGFTAAYWVGPRTSEDRQNFPPNNIIHMLGGAGFLWLGWTGFNGGAPFEAGNIASLAIFNTHLCTATSLLVWLSLDLVVYRKSSVIGAVQGMMCGLVCITPGAGLVDPWAAVIMGAMSGSIPWYTMMVLHRRSAFFQSVDDTLGVFHTHAVAGFLGGVLSGLFAKPKLLEMMYGTDMDFGTGLLYGFIEGKMGRGFKQMGFQIIGAAFITVWNVIVTSLICILIGRIVDLRMNEEDLEIGDDAAHGEEAYALWGDGERTRIPRLHINPSLPSFCRRRLTIPMAKQEMRP 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00914 487 PANTHER AMMONIUM TRANSPORTER MEP2 12 475 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bva08g00914 487 PANTHER AMMONIUM TRANSPORTER 12 475 - -
Bva08g00914 487 SUPERFAMILY Ammonium transporter 27 429 - -
Bva08g00914 487 PRINTS Rhesus blood group protein signature 255 277 IPR002229 GO:0005887
Bva08g00914 487 PRINTS Rhesus blood group protein signature 129 145 IPR002229 GO:0005887
Bva08g00914 487 PRINTS Rhesus blood group protein signature 224 242 IPR002229 GO:0005887
Bva08g00914 487 Gene3D Ammonium transporter AmtB like domains 16 451 IPR029020 -
Bva08g00914 487 TIGRFAM amt: ammonium transporter 32 448 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bva08g00914 487 Pfam Ammonium Transporter Family 34 448 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bva08g00914 487 ProSitePatterns Ammonium transporters signature. 185 210 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00914 Bva-Chr8 4658039 4658605 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00914 125 461 Inorganic Solute Cotransporters AT2G38290 58.876 8.42e-133 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00914 K03320 - gmx:100815876 756.518