Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00902 ATGATGGTGGGATTTATTGCTGGAATTCTATCAGTAATGGTTGTGGCCTCGCTATATTGCCTCTTGAGGAGAAAGGTCATTCCGTTTCTTAAGCGGGGTAGAACTGTGAAAGgtaaagaaaagaaagggttAGAATATGATAAGATATCGTTAAGGTGTTTTAACTTGGAGGAGCTTGAGAAGGCTACAGATAATTTTAGCCAAGATTGCTTGCTGGGTTCTGGGGCATTTGGAAATGTCTACAAGGGAAACTTTGGCATAGAAGGAACATTAGCGATCAAAAGAGCTCACTGTGAATCTTTTTTAACTGCTGAACAATTCAGAAATGAAGTGAGGCTCCTTTCAAAAGTAAAGCACAGGAATTTGGTTAGTCTCGTGGGATATTGTGAAGAACAAGAAGGACATGGAGCCAAAATACTAGTCTATGAATATGTGCCTAATGGCTCTCTCCTAGAGTATATGATCGGAAAAAGAGGGAAGAGCTTAACCTGGAGGCAAAGAGTAAAGATAGCAATAGGAGCAGCTAGAGGCATTGCTTATTTGCACGAAGGGGTGAAACCAAGCATAATCCATCGTGATATAAAACCAAGCAACATCTTGCTAGGAGAAGGGTTTGAGGCCAAGGTTTCAGATTTTGGGCTGGTAAAATCAGGACCTATAGGAGATCAATCACACGTTAGCAGCCAAATCAAAGGGACTCCAGGGTACCTTGACCCTGCTTACTGCTCAAGCTTTCATTTGAGCACATTCAGTGATGTTTATAGCTTTGGTGTCATACTCCTGCAACTTGTTTCAGTTAGACCTGTAGTTGATTCAACCAAAAACCAGAATAATCTTCACATCGTTGACTGGTCATGGCCTAGTTTAGAGAAGGGTAATGTTGAAGAAATCTTAGATGCAAACCTATTATGTGAGCCATGCAATATGAAAGTTATGCTAAAGATGGGGCAACTTGCTATGAAATGTGTGGCTCCAGTACCAAAACATCGTCCTACAATGACTCAGGTGTGTCAAGAATTAGAAGCAGCTCTCAACTCGGCTGATAATAGCCATGTCGACAAGAGCCCTTGGAAAGGTTTCCGCAGATCCTTTGGGTCATCTCAGCATTCAGCAGAATCATCGGAGTCTCGAAAATCAATGGAGAACCACGATTATTCACAGAGCTTCGTGAGCATTGATGGCGTTGGGTTTCAGAAGTTTGTTATTGACATGGATAGCGTCTCCTTTCAGAGCACAATGTTGAAGTGTCTGGAAAATAATAGCACTGGCGTTGACAATGTTGATAAGAACAGTTTGAGGAGAATACAAGAAGATGAAGCCGtagaagaccaaaattg 1337 0.4084 MMVGFIAGILSVMVVASLYCLLRRKVIPFLKRGRTVKGKEKKGLEYDKISLRCFNLEELEKATDNFSQDCLLGSGAFGNVYKGNFGIEGTLAIKRAHCESFLTAEQFRNEVRLLSKVKHRNLVSLVGYCEEQEGHGAKILVYEYVPNGSLLEYMIGKRGKSLTWRQRVKIAIGAARGIAYLHEGVKPSIIHRDIKPSNILLGEGFEAKVSDFGLVKSGPIGDQSHVSSQIKGTPGYLDPAYCSSFHLSTFSDVYSFGVILLQLVSVRPVVDSTKNQNNLHIVDWSWPSLEKGNVEEILDANLLCEPCNMKVMLKMGQLAMKCVAPVPKHRPTMTQVCQELEAALNSADNSHVDKSPWKGFRRSFGSSQHSAESSESRKSMENHDYSQSFVSIDGVGFQKFVIDMDSVSFQSTMLKCLENNSTGVDNVDKNSLRRIQEDEAVEDQN 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00902 445 ProSiteProfiles Protein kinase domain profile. 66 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00902 445 MobiDBLite consensus disorder prediction 363 382 - -
Bva08g00902 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Bva08g00902 445 Gene3D Transferase(Phosphotransferase) domain 1 145 360 - -
Bva08g00902 445 Pfam Protein tyrosine and serine/threonine kinase 71 340 IPR001245 GO:0004672|GO:0006468
Bva08g00902 445 SMART serkin_6 66 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00902 445 SUPERFAMILY Protein kinase-like (PK-like) 48 340 IPR011009 -
Bva08g00902 445 PANTHER OS01G0750732 PROTEIN 5 391 - -
Bva08g00902 445 ProSitePatterns Protein kinases ATP-binding region signature. 72 94 IPR017441 GO:0005524
Bva08g00902 445 Gene3D Phosphorylase Kinase; domain 1 36 144 - -
Bva08g00902 445 CDD STKc_IRAK 72 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00902 Bva-Chr8 4602647 4604712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00902 2 340 Receptor kinase-like Gene Family AT1G51880 41.642 9.02e-77 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bva08g00902 PK_Tyr_Ser-Thr 2.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00902 - - gmx:106794267 619.387