LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva08g00897	ATGTCCATCATGGCAGAATTCTTGAGCTTAATGCTCATGTTTTCAGTAGCTTCCATAGGAAACTCACTGAGCTTAAACTACTATGAAAAGACATGCCCTGATGCTGAGTCCATTGTCGCCAAGACTGTGAAGGATGCATTTTCTAACGACAAAACTGTTCCTGCAGCACTCCTCCGACTGCACTTCCATGACTGCTTCATCAGGGGATGTGATGCCTCTGTGCTACTAAATTCAAGAGGAAACAACAAAGCAGAGAAAGACGGACCACCAAATGTTTCTTTGCATGCATTCTATGTCATTGACGATGCCAAAAAAGCAGTGGAAGCTTCGTGCCCTGGCGTTGTCTCCTGTGCTGATATTCTAGCTTTTGCAGCAAGGGATGCAGTTTATCTGACAGGAGGTCCAACTTGGGATGTAcccaaaggaagaaaagatgGAAGAACATCAAAGGCCAGTGAAACCATACAATTACCAGCACCAACCTTCAACATTTCACAACTAAAACAGAGCTTCTCCCAAAGAGGTCTATCCATGAAAGACTTGGTCGCTCTATCAGGAGGACATACTTTAGGCTTCTCCCACTGCTCATCCTTCCGGAAAAGACTCCACAACTTCGATTCAACACATGATGTTGATCCTACGTTGAATCCATCATTTGCAGCCAAGTTAAAATCAATTTGTCCACTGAAAAACCAACCGAAGAATGCAGGCACCACCATGGACCCTTCTGCAGCAACTTTTGATAGTACATATTACAAGTTAATTATACAAGGGAAAAGCTTGTTCTCTTCTGATCAAGCTCTGCTCAGTAACCCCCAGACTAAGAGTCTAGTTTATGAGTTTGCTACCTCAAGAGAGGCTTTCTACAAGGCATTTGTGAAGTCCATGATCAAAATGGGTAGCATCACTGGTGGACAAGAGGTCAGGAAGGACTGTAGGGTTGTCAATTA	950	0.4284	MSIMAEFLSLMLMFSVASIGNSLSLNYYEKTCPDAESIVAKTVKDAFSNDKTVPAALLRLHFHDCFIRGCDASVLLNSRGNNKAEKDGPPNVSLHAFYVIDDAKKAVEASCPGVVSCADILAFAARDAVYLTGGPTWDVPKGRKDGRTSKASETIQLPAPTFNISQLKQSFSQRGLSMKDLVALSGGHTLGFSHCSSFRKRLHNFDSTHDVDPTLNPSFAAKLKSICPLKNQPKNAGTTMDPSAATFDSTYYKLIIQGKSLFSSDQALLSNPQTKSLVYEFATSREAFYKAFVKSMIKMGSITGGQEVRKDCRVVN	316

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva08g00897	316	ProSitePatterns	Peroxidases proximal heme-ligand signature.	180	190	IPR019793	-
	Bva08g00897	316	PRINTS	Haem peroxidase superfamily signature	54	68	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Bva08g00897	316	PRINTS	Haem peroxidase superfamily signature	133	145	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Bva08g00897	316	PRINTS	Haem peroxidase superfamily signature	180	195	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Bva08g00897	316	PRINTS	Haem peroxidase superfamily signature	240	255	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Bva08g00897	316	PRINTS	Haem peroxidase superfamily signature	115	132	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Bva08g00897	316	PRINTS	Plant peroxidase signature	114	124	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Bva08g00897	316	PRINTS	Plant peroxidase signature	133	148	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Bva08g00897	316	PRINTS	Plant peroxidase signature	56	76	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Bva08g00897	316	PRINTS	Plant peroxidase signature	95	108	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva08g00897	Bva-Chr8	4584271	4585953	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva08g00897	8	315	Peroxidase	AT5G42180	68.285	1.52e-161	451

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva08g00897	K00430		-	gmx:102665908	527.324

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