Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00888 ATGGCATTTCTGTTTTCTGTCAATGTCATAATCAATCTCTGCCCATTGGTAGTGGCAGCAGCcctatcatcatcatcactgCCTAAAAATCAATCAGTTCCTGCTGTTATAATATTTGGTGATTCAATCGTGGATACTGGAAACAACAATTATATTCCCACATTTATGAGGTGTGATTTCTATCCGTATGGGAGGGATTTCAAGGGAGGAAAATCCACTGGGAGGTTTAGCAATGGGAAAATCCCTTCAGACATATTTGCTGAATGGTTTGGTGTTAAGGAGTTCTTGCCACCATATCTCGATCCGAATTTGCAGATTCAGGACCTTCTGACTGGCGTGTCTTTTGCCTCTGCGGGTTCAGGGTATGATCCTCTTACACCCAAATTATTGTCAGTAATTTCACTGGCGGATCAACTAAGGATGTTCAAAGAATACACCAAGAAATTAAAGGAAGCTGTGAGTGAAGAGAGGACAGCTCAAATTCTAGCACAATCCATATTCATCCTCTGCTTGGGAAGCAACGATATTTCTGTGACATATTACTTGACACCCTTCAGGAGGATACAGTATGATTCCGATGAGTATACCAGTATTCTGGCTAATATATCTTTAAGTCTCCAACAGGAACTTTATCAATTGGGAGCAAGaaggatcggagtaatgaatGTAGCCCCGGTAGGGTGTGTGTCACTGCAGAGAACACTGTTTGGAGGTTTATGGAGACGCTGTGTAAAATCAGAAAACCAGTTAACCCAGATTTTCAACTCCAAGCTTTCTTCTGGCATGAATGATCTCAGGAAAAGACTTCCAGATGCCAAGCTTGTCTACCTTGACATTTACAATGCAGTCGATGAAATTGTTAAAAACCCTGCTAAATATGGATTTCAAAGTGCGGCTGAAACATGCTGTGGCTTTTTGAACATAGAGTTGGGGCTTCTCTGTAATATGTTCCAGGTAAAGGTCTGTAAAAATCCATCTGAATATGTATTCTGGGACAGTTATCACCCCACCAAGAGGGCTTATACGGTCATTGCCGAAGAGGTCCTCAGTAAGACCATCGATGAATTTTTCTG 1073 0.4017 MAFLFSVNVIINLCPLVVAAALSSSSLPKNQSVPAVIIFGDSIVDTGNNNYIPTFMRCDFYPYGRDFKGGKSTGRFSNGKIPSDIFAEWFGVKEFLPPYLDPNLQIQDLLTGVSFASAGSGYDPLTPKLLSVISLADQLRMFKEYTKKLKEAVSEERTAQILAQSIFILCLGSNDISVTYYLTPFRRIQYDSDEYTSILANISLSLQQELYQLGARRIGVMNVAPVGCVSLQRTLFGGLWRRCVKSENQLTQIFNSKLSSGMNDLRKRLPDAKLVYLDIYNAVDEIVKNPAKYGFQSAAETCCGFLNIELGLLCNMFQVKVCKNPSEYVFWDSYHPTKRAYTVIAEEVLSKTIDEFF 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00888 357 CDD SGNH_plant_lipase_like 34 351 IPR035669 -
Bva08g00888 357 Pfam GDSL-like Lipase/Acylhydrolase 36 347 IPR001087 GO:0016788
Bva08g00888 357 Gene3D SGNH hydrolase 23 353 IPR036514 -
Bva08g00888 357 SUPERFAMILY SGNH hydrolase 14 349 - -
Bva08g00888 357 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 4 356 - -
Bva08g00888 357 PANTHER GDSL ESTERASE/LIPASE EXL3 4 356 - -
Bva08g00888 357 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 36 47 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00888 Bva-Chr8 4543398 4544854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00888 30 349 Pollen Coat Proteome AT1G75910 39.385 4.07e-82 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00888 - - qsu:111991749 426.787